Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 MIR3652-201ENST00000579335 131 ntBASIC6.34□□□□□ -1.4
HMCN1Q96RW7 AL138966.2-201ENST00000621997 464 ntBASIC6.34□□□□□ -1.4
HMCN1Q96RW7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
HMCN1Q96RW7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
HMCN1Q96RW7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 AC061975.6-201ENST00000579045 1553 ntBASIC6.33□□□□□ -1.4
HMCN1Q96RW7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 AC124283.5-201ENST00000624661 1809 ntBASIC6.33□□□□□ -1.4
HMCN1Q96RW7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 CALY-203ENST00000368558 825 ntTSL 5 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC6.33□□□□□ -1.4
HMCN1Q96RW7 KRT8P8-201ENST00000434750 1448 ntBASIC6.33□□□□□ -1.4
HMCN1Q96RW7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 HMGA1P5-201ENST00000412453 271 ntBASIC6.33□□□□□ -1.4
HMCN1Q96RW7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 AL732292.2-201ENST00000609649 430 ntBASIC6.33□□□□□ -1.4
HMCN1Q96RW7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC6.33□□□□□ -1.4
HMCN1Q96RW7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 DGCR10-201ENST00000609839 495 ntBASIC6.32□□□□□ -1.4
HMCN1Q96RW7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 BX842568.4-201ENST00000421222 227 ntBASIC6.32□□□□□ -1.4
HMCN1Q96RW7 FAM8A3P-201ENST00000427218 844 ntBASIC6.32□□□□□ -1.4
HMCN1Q96RW7 AC005104.2-201ENST00000427818 678 ntBASIC6.32□□□□□ -1.4
HMCN1Q96RW7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 NME4-212ENST00000621774 904 ntTSL 3 BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 AP004607.7-201ENST00000527152 1677 ntBASIC6.32□□□□□ -1.4
HMCN1Q96RW7 KRT18P68-201ENST00000392293 1000 ntBASIC6.32□□□□□ -1.4
HMCN1Q96RW7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 NUS1P1-201ENST00000446295 882 ntBASIC6.32□□□□□ -1.4
HMCN1Q96RW7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms