Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DUX3Q96PT4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
DUX3Q96PT4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
DUX3Q96PT4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DUX3Q96PT4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC15.9■□□□□ 0.14
DUX3Q96PT4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
DUX3Q96PT4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC15.9■□□□□ 0.14
DUX3Q96PT4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC15.9■□□□□ 0.14
DUX3Q96PT4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
DUX3Q96PT4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
DUX3Q96PT4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
DUX3Q96PT4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC15.9■□□□□ 0.14
DUX3Q96PT4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC15.9■□□□□ 0.14
DUX3Q96PT4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DUX3Q96PT4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC15.9■□□□□ 0.14
DUX3Q96PT4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
DUX3Q96PT4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
DUX3Q96PT4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC15.9■□□□□ 0.14
DUX3Q96PT4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC15.9■□□□□ 0.14
DUX3Q96PT4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DUX3Q96PT4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC15.9■□□□□ 0.14
DUX3Q96PT4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
DUX3Q96PT4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DUX3Q96PT4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
DUX3Q96PT4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DUX3Q96PT4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
DUX3Q96PT4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
DUX3Q96PT4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
DUX3Q96PT4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
DUX3Q96PT4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
DUX3Q96PT4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
DUX3Q96PT4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
DUX3Q96PT4 CYP2T3P-201ENST00000601990 817 ntBASIC15.89■□□□□ 0.13
DUX3Q96PT4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DUX3Q96PT4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DUX3Q96PT4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DUX3Q96PT4 LINC00565-201ENST00000562710 2331 ntBASIC15.89■□□□□ 0.13
DUX3Q96PT4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
DUX3Q96PT4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DUX3Q96PT4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
DUX3Q96PT4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
DUX3Q96PT4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
DUX3Q96PT4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
DUX3Q96PT4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
DUX3Q96PT4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
DUX3Q96PT4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
DUX3Q96PT4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
DUX3Q96PT4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
DUX3Q96PT4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
DUX3Q96PT4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC15.88■□□□□ 0.13
DUX3Q96PT4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
DUX3Q96PT4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
DUX3Q96PT4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC15.88■□□□□ 0.13
DUX3Q96PT4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
DUX3Q96PT4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC15.88■□□□□ 0.13
DUX3Q96PT4 MYC-209ENST00000641252 345 ntBASIC15.88■□□□□ 0.13
DUX3Q96PT4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
DUX3Q96PT4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
DUX3Q96PT4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
DUX3Q96PT4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
DUX3Q96PT4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
DUX3Q96PT4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC15.88■□□□□ 0.13
DUX3Q96PT4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
DUX3Q96PT4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
DUX3Q96PT4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
DUX3Q96PT4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DUX3Q96PT4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
DUX3Q96PT4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
DUX3Q96PT4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
DUX3Q96PT4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
DUX3Q96PT4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC15.87■□□□□ 0.13
DUX3Q96PT4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DUX3Q96PT4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DUX3Q96PT4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DUX3Q96PT4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC15.87■□□□□ 0.13
DUX3Q96PT4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
DUX3Q96PT4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC15.87■□□□□ 0.13
DUX3Q96PT4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
DUX3Q96PT4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
DUX3Q96PT4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DUX3Q96PT4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DUX3Q96PT4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC15.87■□□□□ 0.13
DUX3Q96PT4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
DUX3Q96PT4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
DUX3Q96PT4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
DUX3Q96PT4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DUX3Q96PT4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.86■□□□□ 0.13
DUX3Q96PT4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
DUX3Q96PT4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DUX3Q96PT4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DUX3Q96PT4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
DUX3Q96PT4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC15.86■□□□□ 0.13
DUX3Q96PT4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DUX3Q96PT4 AC116050.2-201ENST00000612102 1779 ntBASIC15.86■□□□□ 0.13
DUX3Q96PT4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
DUX3Q96PT4 MCRIP2P1-201ENST00000394346 511 ntBASIC15.86■□□□□ 0.13
DUX3Q96PT4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC15.86■□□□□ 0.13
DUX3Q96PT4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC15.86■□□□□ 0.13
DUX3Q96PT4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC15.86■□□□□ 0.13
DUX3Q96PT4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms