Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RPRD1AQ96P16 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.1■□□□□ 0.97
RPRD1AQ96P16 AC027702.1-201ENST00000563810 1770 ntBASIC21.1■□□□□ 0.97
RPRD1AQ96P16 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RPRD1AQ96P16 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.1■□□□□ 0.97
RPRD1AQ96P16 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPRD1AQ96P16 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPRD1AQ96P16 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
RPRD1AQ96P16 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.1■□□□□ 0.97
RPRD1AQ96P16 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPRD1AQ96P16 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.1■□□□□ 0.97
RPRD1AQ96P16 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPRD1AQ96P16 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RPRD1AQ96P16 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.1■□□□□ 0.97
RPRD1AQ96P16 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RPRD1AQ96P16 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.1■□□□□ 0.97
RPRD1AQ96P16 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.1■□□□□ 0.97
RPRD1AQ96P16 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
RPRD1AQ96P16 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.1■□□□□ 0.97
RPRD1AQ96P16 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.1■□□□□ 0.97
RPRD1AQ96P16 AL589743.5-201ENST00000616611 1050 ntBASIC21.1■□□□□ 0.97
RPRD1AQ96P16 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.1■□□□□ 0.97
RPRD1AQ96P16 AC133041.1-202ENST00000642053 222 ntBASIC21.1■□□□□ 0.97
RPRD1AQ96P16 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPRD1AQ96P16 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
RPRD1AQ96P16 AC087633.2-202ENST00000565166 1439 ntBASIC21.1■□□□□ 0.97
RPRD1AQ96P16 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.1■□□□□ 0.97
RPRD1AQ96P16 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.1■□□□□ 0.97
RPRD1AQ96P16 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
RPRD1AQ96P16 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.1■□□□□ 0.97
RPRD1AQ96P16 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPRD1AQ96P16 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPRD1AQ96P16 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RPRD1AQ96P16 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPRD1AQ96P16 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPRD1AQ96P16 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.09■□□□□ 0.97
RPRD1AQ96P16 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RPRD1AQ96P16 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPRD1AQ96P16 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPRD1AQ96P16 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPRD1AQ96P16 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPRD1AQ96P16 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPRD1AQ96P16 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RPRD1AQ96P16 PGM5P4-201ENST00000421970 445 ntBASIC21.09■□□□□ 0.97
RPRD1AQ96P16 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.09■□□□□ 0.97
RPRD1AQ96P16 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RPRD1AQ96P16 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.09■□□□□ 0.97
RPRD1AQ96P16 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RPRD1AQ96P16 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.09■□□□□ 0.97
RPRD1AQ96P16 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RPRD1AQ96P16 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.09■□□□□ 0.97
RPRD1AQ96P16 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPRD1AQ96P16 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.08■□□□□ 0.97
RPRD1AQ96P16 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPRD1AQ96P16 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPRD1AQ96P16 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RPRD1AQ96P16 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.08■□□□□ 0.97
RPRD1AQ96P16 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RPRD1AQ96P16 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.08■□□□□ 0.97
RPRD1AQ96P16 AC073210.2-201ENST00000430369 194 ntBASIC21.08■□□□□ 0.97
RPRD1AQ96P16 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.08■□□□□ 0.97
RPRD1AQ96P16 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.08■□□□□ 0.97
RPRD1AQ96P16 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.08■□□□□ 0.97
RPRD1AQ96P16 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RPRD1AQ96P16 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPRD1AQ96P16 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RPRD1AQ96P16 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.08■□□□□ 0.96
RPRD1AQ96P16 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
RPRD1AQ96P16 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.07■□□□□ 0.96
RPRD1AQ96P16 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.07■□□□□ 0.96
RPRD1AQ96P16 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.07■□□□□ 0.96
RPRD1AQ96P16 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPRD1AQ96P16 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPRD1AQ96P16 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RPRD1AQ96P16 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.07■□□□□ 0.96
RPRD1AQ96P16 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.07■□□□□ 0.96
RPRD1AQ96P16 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.07■□□□□ 0.96
RPRD1AQ96P16 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.07■□□□□ 0.96
RPRD1AQ96P16 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPRD1AQ96P16 AC105020.6-201ENST00000621523 1217 ntBASIC21.07■□□□□ 0.96
RPRD1AQ96P16 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPRD1AQ96P16 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPRD1AQ96P16 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPRD1AQ96P16 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.07■□□□□ 0.96
RPRD1AQ96P16 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPRD1AQ96P16 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPRD1AQ96P16 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RPRD1AQ96P16 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
RPRD1AQ96P16 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPRD1AQ96P16 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RPRD1AQ96P16 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
RPRD1AQ96P16 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
RPRD1AQ96P16 DUSP5P2-201ENST00000426873 1033 ntBASIC21.06■□□□□ 0.96
RPRD1AQ96P16 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.06■□□□□ 0.96
RPRD1AQ96P16 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.06■□□□□ 0.96
RPRD1AQ96P16 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.06■□□□□ 0.96
RPRD1AQ96P16 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RPRD1AQ96P16 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.06■□□□□ 0.96
RPRD1AQ96P16 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
RPRD1AQ96P16 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms