Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.32■□□□□ 0.52
FOXN4Q96NZ1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
FOXN4Q96NZ1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.32■□□□□ 0.52
FOXN4Q96NZ1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXN4Q96NZ1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.32■□□□□ 0.52
FOXN4Q96NZ1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.32■□□□□ 0.52
FOXN4Q96NZ1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.32■□□□□ 0.52
FOXN4Q96NZ1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
FOXN4Q96NZ1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXN4Q96NZ1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.32■□□□□ 0.52
FOXN4Q96NZ1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
FOXN4Q96NZ1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXN4Q96NZ1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.32■□□□□ 0.52
FOXN4Q96NZ1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXN4Q96NZ1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXN4Q96NZ1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXN4Q96NZ1 AP005212.1-201ENST00000581547 1997 ntBASIC18.31■□□□□ 0.52
FOXN4Q96NZ1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXN4Q96NZ1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.31■□□□□ 0.52
FOXN4Q96NZ1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXN4Q96NZ1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXN4Q96NZ1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXN4Q96NZ1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXN4Q96NZ1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.31■□□□□ 0.52
FOXN4Q96NZ1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXN4Q96NZ1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXN4Q96NZ1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FOXN4Q96NZ1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.31■□□□□ 0.52
FOXN4Q96NZ1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.31■□□□□ 0.52
FOXN4Q96NZ1 KRT18P61-201ENST00000585825 1298 ntBASIC18.31■□□□□ 0.52
FOXN4Q96NZ1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXN4Q96NZ1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.31■□□□□ 0.52
FOXN4Q96NZ1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
FOXN4Q96NZ1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.31■□□□□ 0.52
FOXN4Q96NZ1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FOXN4Q96NZ1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXN4Q96NZ1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXN4Q96NZ1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXN4Q96NZ1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
FOXN4Q96NZ1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.3■□□□□ 0.52
FOXN4Q96NZ1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXN4Q96NZ1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXN4Q96NZ1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXN4Q96NZ1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
FOXN4Q96NZ1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXN4Q96NZ1 AC120498.10-201ENST00000621827 505 ntBASIC18.3■□□□□ 0.52
FOXN4Q96NZ1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXN4Q96NZ1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXN4Q96NZ1 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.3■□□□□ 0.52
FOXN4Q96NZ1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXN4Q96NZ1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.3■□□□□ 0.52
FOXN4Q96NZ1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.3■□□□□ 0.52
FOXN4Q96NZ1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXN4Q96NZ1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXN4Q96NZ1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
FOXN4Q96NZ1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
FOXN4Q96NZ1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXN4Q96NZ1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
FOXN4Q96NZ1 AC011484.1-201ENST00000377652 1995 ntBASIC18.3■□□□□ 0.52
FOXN4Q96NZ1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXN4Q96NZ1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXN4Q96NZ1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXN4Q96NZ1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXN4Q96NZ1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.29■□□□□ 0.52
FOXN4Q96NZ1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXN4Q96NZ1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXN4Q96NZ1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
FOXN4Q96NZ1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXN4Q96NZ1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
FOXN4Q96NZ1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.29■□□□□ 0.52
FOXN4Q96NZ1 AC016769.1-201ENST00000409132 1010 ntBASIC18.29■□□□□ 0.52
FOXN4Q96NZ1 AC137761.2-201ENST00000561729 223 ntBASIC18.29■□□□□ 0.52
FOXN4Q96NZ1 AC145350.3-201ENST00000569033 163 ntBASIC18.29■□□□□ 0.52
FOXN4Q96NZ1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
FOXN4Q96NZ1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.29■□□□□ 0.52
FOXN4Q96NZ1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXN4Q96NZ1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXN4Q96NZ1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
FOXN4Q96NZ1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.29■□□□□ 0.52
FOXN4Q96NZ1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
FOXN4Q96NZ1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXN4Q96NZ1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FOXN4Q96NZ1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.28■□□□□ 0.52
FOXN4Q96NZ1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXN4Q96NZ1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXN4Q96NZ1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXN4Q96NZ1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXN4Q96NZ1 AC245052.3-201ENST00000450182 901 ntBASIC18.28■□□□□ 0.52
FOXN4Q96NZ1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.28■□□□□ 0.52
FOXN4Q96NZ1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.28■□□□□ 0.52
FOXN4Q96NZ1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
FOXN4Q96NZ1 KRT16P2-201ENST00000414673 1423 ntBASIC18.28■□□□□ 0.52
FOXN4Q96NZ1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXN4Q96NZ1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FOXN4Q96NZ1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.28■□□□□ 0.52
FOXN4Q96NZ1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
FOXN4Q96NZ1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.28■□□□□ 0.52
FOXN4Q96NZ1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FOXN4Q96NZ1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.28■□□□□ 0.52
FOXN4Q96NZ1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms