Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ZNF48Q96MX3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF48Q96MX3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.65■□□□□ 0.26
ZNF48Q96MX3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF48Q96MX3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF48Q96MX3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF48Q96MX3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF48Q96MX3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF48Q96MX3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF48Q96MX3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF48Q96MX3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF48Q96MX3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF48Q96MX3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF48Q96MX3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF48Q96MX3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF48Q96MX3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF48Q96MX3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.64■□□□□ 0.25
ZNF48Q96MX3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
ZNF48Q96MX3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF48Q96MX3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.64■□□□□ 0.25
ZNF48Q96MX3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF48Q96MX3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF48Q96MX3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF48Q96MX3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF48Q96MX3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF48Q96MX3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.64■□□□□ 0.25
ZNF48Q96MX3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF48Q96MX3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF48Q96MX3 Z98882.1-201ENST00000622160 2253 ntBASIC16.63■□□□□ 0.25
ZNF48Q96MX3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF48Q96MX3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ZNF48Q96MX3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF48Q96MX3 CYP21A1P-202ENST00000354927 1481 ntBASIC16.63■□□□□ 0.25
ZNF48Q96MX3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ZNF48Q96MX3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.63■□□□□ 0.25
ZNF48Q96MX3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ZNF48Q96MX3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF48Q96MX3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF48Q96MX3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.63■□□□□ 0.25
ZNF48Q96MX3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
ZNF48Q96MX3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.63■□□□□ 0.25
ZNF48Q96MX3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF48Q96MX3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.63■□□□□ 0.25
ZNF48Q96MX3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.63■□□□□ 0.25
ZNF48Q96MX3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF48Q96MX3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF48Q96MX3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF48Q96MX3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF48Q96MX3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ZNF48Q96MX3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF48Q96MX3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
ZNF48Q96MX3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF48Q96MX3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ZNF48Q96MX3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF48Q96MX3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.62■□□□□ 0.25
ZNF48Q96MX3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF48Q96MX3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF48Q96MX3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.62■□□□□ 0.25
ZNF48Q96MX3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF48Q96MX3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF48Q96MX3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF48Q96MX3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ZNF48Q96MX3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF48Q96MX3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF48Q96MX3 PNMA6B-201ENST00000538162 1200 ntBASIC16.62■□□□□ 0.25
ZNF48Q96MX3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
ZNF48Q96MX3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF48Q96MX3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF48Q96MX3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
ZNF48Q96MX3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.62■□□□□ 0.25
ZNF48Q96MX3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF48Q96MX3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.62■□□□□ 0.25
ZNF48Q96MX3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
ZNF48Q96MX3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF48Q96MX3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF48Q96MX3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.62■□□□□ 0.25
ZNF48Q96MX3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
ZNF48Q96MX3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF48Q96MX3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF48Q96MX3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF48Q96MX3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.61■□□□□ 0.25
ZNF48Q96MX3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.61■□□□□ 0.25
ZNF48Q96MX3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.61■□□□□ 0.25
ZNF48Q96MX3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF48Q96MX3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF48Q96MX3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.61■□□□□ 0.25
ZNF48Q96MX3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF48Q96MX3 AL596275.1-201ENST00000423464 877 ntBASIC16.61■□□□□ 0.25
ZNF48Q96MX3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF48Q96MX3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF48Q96MX3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
ZNF48Q96MX3 UNC93B4-201ENST00000505679 747 ntBASIC16.61■□□□□ 0.25
ZNF48Q96MX3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.61■□□□□ 0.25
ZNF48Q96MX3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.61■□□□□ 0.25
ZNF48Q96MX3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF48Q96MX3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF48Q96MX3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.61■□□□□ 0.25
ZNF48Q96MX3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF48Q96MX3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms