Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.86■□□□□ 0.61
COX4I2Q96KJ9 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
COX4I2Q96KJ9 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COX4I2Q96KJ9 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.86■□□□□ 0.61
COX4I2Q96KJ9 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.86■□□□□ 0.61
COX4I2Q96KJ9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.86■□□□□ 0.61
COX4I2Q96KJ9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COX4I2Q96KJ9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COX4I2Q96KJ9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COX4I2Q96KJ9 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COX4I2Q96KJ9 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COX4I2Q96KJ9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COX4I2Q96KJ9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.86■□□□□ 0.61
COX4I2Q96KJ9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COX4I2Q96KJ9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COX4I2Q96KJ9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
COX4I2Q96KJ9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COX4I2Q96KJ9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COX4I2Q96KJ9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
COX4I2Q96KJ9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.85■□□□□ 0.61
COX4I2Q96KJ9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COX4I2Q96KJ9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.85■□□□□ 0.61
COX4I2Q96KJ9 KRT18P14-201ENST00000534205 1250 ntBASIC18.85■□□□□ 0.61
COX4I2Q96KJ9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
COX4I2Q96KJ9 pRNA.6-201ENST00000610482 90 ntBASIC18.85■□□□□ 0.61
COX4I2Q96KJ9 pRNA.5-201ENST00000612139 90 ntBASIC18.85■□□□□ 0.61
COX4I2Q96KJ9 pRNA.11-201ENST00000618423 90 ntBASIC18.85■□□□□ 0.61
COX4I2Q96KJ9 pRNA.13-201ENST00000619112 90 ntBASIC18.85■□□□□ 0.61
COX4I2Q96KJ9 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
COX4I2Q96KJ9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COX4I2Q96KJ9 AP000974.1-201ENST00000623909 2387 ntBASIC18.85■□□□□ 0.61
COX4I2Q96KJ9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COX4I2Q96KJ9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
COX4I2Q96KJ9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
COX4I2Q96KJ9 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COX4I2Q96KJ9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
COX4I2Q96KJ9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COX4I2Q96KJ9 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
COX4I2Q96KJ9 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.85■□□□□ 0.61
COX4I2Q96KJ9 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COX4I2Q96KJ9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COX4I2Q96KJ9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
COX4I2Q96KJ9 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COX4I2Q96KJ9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COX4I2Q96KJ9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COX4I2Q96KJ9 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.84■□□□□ 0.61
COX4I2Q96KJ9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.84■□□□□ 0.61
COX4I2Q96KJ9 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.84■□□□□ 0.61
COX4I2Q96KJ9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.84■□□□□ 0.61
COX4I2Q96KJ9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.84■□□□□ 0.61
COX4I2Q96KJ9 TERF1P2-201ENST00000583350 1212 ntBASIC18.84■□□□□ 0.61
COX4I2Q96KJ9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.84■□□□□ 0.61
COX4I2Q96KJ9 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COX4I2Q96KJ9 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COX4I2Q96KJ9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COX4I2Q96KJ9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
COX4I2Q96KJ9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
COX4I2Q96KJ9 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
COX4I2Q96KJ9 AC138932.1-201ENST00000534164 6830 ntBASIC18.84■□□□□ 0.61
COX4I2Q96KJ9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COX4I2Q96KJ9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
COX4I2Q96KJ9 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.83■□□□□ 0.61
COX4I2Q96KJ9 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.83■□□□□ 0.61
COX4I2Q96KJ9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COX4I2Q96KJ9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
COX4I2Q96KJ9 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COX4I2Q96KJ9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COX4I2Q96KJ9 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COX4I2Q96KJ9 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
COX4I2Q96KJ9 AC144652.1-201ENST00000609974 1624 ntBASIC18.83■□□□□ 0.61
COX4I2Q96KJ9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.83■□□□□ 0.6
COX4I2Q96KJ9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.83■□□□□ 0.6
COX4I2Q96KJ9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
COX4I2Q96KJ9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
COX4I2Q96KJ9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.83■□□□□ 0.6
COX4I2Q96KJ9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
COX4I2Q96KJ9 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.83■□□□□ 0.6
COX4I2Q96KJ9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COX4I2Q96KJ9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.83■□□□□ 0.6
COX4I2Q96KJ9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.83■□□□□ 0.6
COX4I2Q96KJ9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
COX4I2Q96KJ9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COX4I2Q96KJ9 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COX4I2Q96KJ9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COX4I2Q96KJ9 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.82■□□□□ 0.6
COX4I2Q96KJ9 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.82■□□□□ 0.6
COX4I2Q96KJ9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COX4I2Q96KJ9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COX4I2Q96KJ9 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
COX4I2Q96KJ9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.82■□□□□ 0.6
COX4I2Q96KJ9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.82■□□□□ 0.6
COX4I2Q96KJ9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
COX4I2Q96KJ9 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
COX4I2Q96KJ9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COX4I2Q96KJ9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COX4I2Q96KJ9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
COX4I2Q96KJ9 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COX4I2Q96KJ9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COX4I2Q96KJ9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COX4I2Q96KJ9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms