Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
RITA1Q96K30 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RITA1Q96K30 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RITA1Q96K30 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RITA1Q96K30 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RITA1Q96K30 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RITA1Q96K30 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RITA1Q96K30 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RITA1Q96K30 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.44■□□□□ 0.22
RITA1Q96K30 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.44■□□□□ 0.22
RITA1Q96K30 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RITA1Q96K30 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.44■□□□□ 0.22
RITA1Q96K30 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RITA1Q96K30 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RITA1Q96K30 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RITA1Q96K30 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RITA1Q96K30 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RITA1Q96K30 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RITA1Q96K30 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.44■□□□□ 0.22
RITA1Q96K30 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.44■□□□□ 0.22
RITA1Q96K30 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RITA1Q96K30 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RITA1Q96K30 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RITA1Q96K30 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RITA1Q96K30 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RITA1Q96K30 AC068338.2-201ENST00000563278 1430 ntBASIC16.44■□□□□ 0.22
RITA1Q96K30 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
RITA1Q96K30 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RITA1Q96K30 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RITA1Q96K30 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RITA1Q96K30 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RITA1Q96K30 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RITA1Q96K30 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RITA1Q96K30 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RITA1Q96K30 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
RITA1Q96K30 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RITA1Q96K30 CDV3P1-201ENST00000471403 739 ntBASIC16.43■□□□□ 0.22
RITA1Q96K30 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RITA1Q96K30 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
RITA1Q96K30 MIR2861-201ENST00000636310 90 ntBASIC16.43■□□□□ 0.22
RITA1Q96K30 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RITA1Q96K30 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.43■□□□□ 0.22
RITA1Q96K30 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.43■□□□□ 0.22
RITA1Q96K30 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RITA1Q96K30 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.43■□□□□ 0.22
RITA1Q96K30 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
RITA1Q96K30 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RITA1Q96K30 LINC01521-201ENST00000504184 1943 ntBASIC16.43■□□□□ 0.22
RITA1Q96K30 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RITA1Q96K30 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.42■□□□□ 0.22
RITA1Q96K30 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RITA1Q96K30 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.42■□□□□ 0.22
RITA1Q96K30 AC007322.4-201ENST00000509611 723 ntBASIC16.42■□□□□ 0.22
RITA1Q96K30 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RITA1Q96K30 AL137784.2-201ENST00000607332 1000 ntBASIC16.42■□□□□ 0.22
RITA1Q96K30 AC080038.1-201ENST00000611274 1154 ntBASIC16.42■□□□□ 0.22
RITA1Q96K30 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.42■□□□□ 0.22
RITA1Q96K30 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RITA1Q96K30 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RITA1Q96K30 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.42■□□□□ 0.22
RITA1Q96K30 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RITA1Q96K30 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
RITA1Q96K30 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.42■□□□□ 0.22
RITA1Q96K30 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RITA1Q96K30 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RITA1Q96K30 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
RITA1Q96K30 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
RITA1Q96K30 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.41■□□□□ 0.22
RITA1Q96K30 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RITA1Q96K30 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
RITA1Q96K30 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.41■□□□□ 0.22
RITA1Q96K30 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RITA1Q96K30 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
RITA1Q96K30 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.41■□□□□ 0.22
RITA1Q96K30 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.41■□□□□ 0.22
RITA1Q96K30 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.41■□□□□ 0.22
RITA1Q96K30 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.41■□□□□ 0.22
RITA1Q96K30 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RITA1Q96K30 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RITA1Q96K30 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RITA1Q96K30 GABARAPL3-202ENST00000624044 1851 ntBASIC16.41■□□□□ 0.22
RITA1Q96K30 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.41■□□□□ 0.22
RITA1Q96K30 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.41■□□□□ 0.22
RITA1Q96K30 AC020907.5-201ENST00000624372 1936 ntBASIC16.41■□□□□ 0.22
RITA1Q96K30 SLC25A24-204ENST00000569674 2357 ntBASIC16.41■□□□□ 0.22
RITA1Q96K30 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RITA1Q96K30 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RITA1Q96K30 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RITA1Q96K30 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RITA1Q96K30 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.4■□□□□ 0.22
RITA1Q96K30 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RITA1Q96K30 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RITA1Q96K30 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RITA1Q96K30 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RITA1Q96K30 AC007322.1-201ENST00000426983 750 ntBASIC16.4■□□□□ 0.22
RITA1Q96K30 CDCA4P2-201ENST00000441182 718 ntBASIC16.4■□□□□ 0.22
RITA1Q96K30 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.4■□□□□ 0.22
RITA1Q96K30 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.4■□□□□ 0.22
RITA1Q96K30 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.4■□□□□ 0.22
RITA1Q96K30 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms