Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RTP4Q96DX8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RTP4Q96DX8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTP4Q96DX8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
RTP4Q96DX8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RTP4Q96DX8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.91■□□□□ 0.94
RTP4Q96DX8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTP4Q96DX8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTP4Q96DX8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTP4Q96DX8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTP4Q96DX8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTP4Q96DX8 AC007322.3-201ENST00000426526 701 ntBASIC20.91■□□□□ 0.94
RTP4Q96DX8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.91■□□□□ 0.94
RTP4Q96DX8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTP4Q96DX8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTP4Q96DX8 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.91■□□□□ 0.94
RTP4Q96DX8 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.91■□□□□ 0.94
RTP4Q96DX8 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTP4Q96DX8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.9■□□□□ 0.94
RTP4Q96DX8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.9■□□□□ 0.94
RTP4Q96DX8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.9■□□□□ 0.94
RTP4Q96DX8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTP4Q96DX8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTP4Q96DX8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTP4Q96DX8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTP4Q96DX8 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTP4Q96DX8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.9■□□□□ 0.94
RTP4Q96DX8 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.9■□□□□ 0.94
RTP4Q96DX8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RTP4Q96DX8 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.9■□□□□ 0.94
RTP4Q96DX8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
RTP4Q96DX8 UBE2DNL-204ENST00000602536 740 ntBASIC20.9■□□□□ 0.94
RTP4Q96DX8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RTP4Q96DX8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RTP4Q96DX8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RTP4Q96DX8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTP4Q96DX8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RTP4Q96DX8 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RTP4Q96DX8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RTP4Q96DX8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTP4Q96DX8 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTP4Q96DX8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTP4Q96DX8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.89■□□□□ 0.93
RTP4Q96DX8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTP4Q96DX8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTP4Q96DX8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.89■□□□□ 0.93
RTP4Q96DX8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RTP4Q96DX8 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTP4Q96DX8 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTP4Q96DX8 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTP4Q96DX8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.89■□□□□ 0.93
RTP4Q96DX8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTP4Q96DX8 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTP4Q96DX8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.89■□□□□ 0.93
RTP4Q96DX8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.88■□□□□ 0.93
RTP4Q96DX8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RTP4Q96DX8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.88■□□□□ 0.93
RTP4Q96DX8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTP4Q96DX8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.88■□□□□ 0.93
RTP4Q96DX8 KRT8P36-201ENST00000489121 1440 ntBASIC20.88■□□□□ 0.93
RTP4Q96DX8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RTP4Q96DX8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTP4Q96DX8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RTP4Q96DX8 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.88■□□□□ 0.93
RTP4Q96DX8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RTP4Q96DX8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.88■□□□□ 0.93
RTP4Q96DX8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTP4Q96DX8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.88■□□□□ 0.93
RTP4Q96DX8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RTP4Q96DX8 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.88■□□□□ 0.93
RTP4Q96DX8 MYCNOS-205ENST00000641950 531 ntBASIC20.88■□□□□ 0.93
RTP4Q96DX8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTP4Q96DX8 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.88■□□□□ 0.93
RTP4Q96DX8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTP4Q96DX8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTP4Q96DX8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTP4Q96DX8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTP4Q96DX8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTP4Q96DX8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RTP4Q96DX8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTP4Q96DX8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTP4Q96DX8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
RTP4Q96DX8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RTP4Q96DX8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTP4Q96DX8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTP4Q96DX8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTP4Q96DX8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTP4Q96DX8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.86■□□□□ 0.93
RTP4Q96DX8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RTP4Q96DX8 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RTP4Q96DX8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTP4Q96DX8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTP4Q96DX8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTP4Q96DX8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTP4Q96DX8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTP4Q96DX8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RTP4Q96DX8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTP4Q96DX8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTP4Q96DX8 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTP4Q96DX8 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms