Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC39Q96DD0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.67■□□□□ 0.9
LRRC39Q96DD0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC39Q96DD0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC39Q96DD0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC39Q96DD0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.66■□□□□ 0.9
LRRC39Q96DD0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC39Q96DD0 SLC7A5P2-201ENST00000553010 536 ntBASIC20.66■□□□□ 0.9
LRRC39Q96DD0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.66■□□□□ 0.9
LRRC39Q96DD0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC39Q96DD0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.66■□□□□ 0.9
LRRC39Q96DD0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC39Q96DD0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC39Q96DD0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
LRRC39Q96DD0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
LRRC39Q96DD0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC39Q96DD0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
LRRC39Q96DD0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC39Q96DD0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC39Q96DD0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC39Q96DD0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC39Q96DD0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC39Q96DD0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.65■□□□□ 0.9
LRRC39Q96DD0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.65■□□□□ 0.9
LRRC39Q96DD0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.65■□□□□ 0.9
LRRC39Q96DD0 SLC7A5P1-201ENST00000568957 537 ntBASIC20.65■□□□□ 0.9
LRRC39Q96DD0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.65■□□□□ 0.9
LRRC39Q96DD0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC39Q96DD0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.65■□□□□ 0.9
LRRC39Q96DD0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC39Q96DD0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.65■□□□□ 0.9
LRRC39Q96DD0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
LRRC39Q96DD0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LRRC39Q96DD0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.64■□□□□ 0.9
LRRC39Q96DD0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
LRRC39Q96DD0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.64■□□□□ 0.9
LRRC39Q96DD0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
LRRC39Q96DD0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC39Q96DD0 AC112907.3-201ENST00000577781 2400 ntBASIC20.64■□□□□ 0.89
LRRC39Q96DD0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC39Q96DD0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.64■□□□□ 0.89
LRRC39Q96DD0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC39Q96DD0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC39Q96DD0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC39Q96DD0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
LRRC39Q96DD0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
LRRC39Q96DD0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.64■□□□□ 0.89
LRRC39Q96DD0 TERF1P2-201ENST00000583350 1212 ntBASIC20.64■□□□□ 0.89
LRRC39Q96DD0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
LRRC39Q96DD0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.64■□□□□ 0.89
LRRC39Q96DD0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC39Q96DD0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.64■□□□□ 0.89
LRRC39Q96DD0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
LRRC39Q96DD0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.64■□□□□ 0.89
LRRC39Q96DD0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
LRRC39Q96DD0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC39Q96DD0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
LRRC39Q96DD0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC39Q96DD0 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.63■□□□□ 0.89
LRRC39Q96DD0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC39Q96DD0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC39Q96DD0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LRRC39Q96DD0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.63■□□□□ 0.89
LRRC39Q96DD0 TCF3P1-201ENST00000423021 1937 ntBASIC20.63■□□□□ 0.89
LRRC39Q96DD0 AFG3L1P-217ENST00000557444 2447 ntBASIC20.63■□□□□ 0.89
LRRC39Q96DD0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC39Q96DD0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.63■□□□□ 0.89
LRRC39Q96DD0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.63■□□□□ 0.89
LRRC39Q96DD0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.63■□□□□ 0.89
LRRC39Q96DD0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.63■□□□□ 0.89
LRRC39Q96DD0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.63■□□□□ 0.89
LRRC39Q96DD0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC39Q96DD0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC39Q96DD0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.63■□□□□ 0.89
LRRC39Q96DD0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC39Q96DD0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.63■□□□□ 0.89
LRRC39Q96DD0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC39Q96DD0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC39Q96DD0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC39Q96DD0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC39Q96DD0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC39Q96DD0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC39Q96DD0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC39Q96DD0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.62■□□□□ 0.89
LRRC39Q96DD0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.62■□□□□ 0.89
LRRC39Q96DD0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.62■□□□□ 0.89
LRRC39Q96DD0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.62■□□□□ 0.89
LRRC39Q96DD0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC39Q96DD0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC39Q96DD0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.62■□□□□ 0.89
LRRC39Q96DD0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LRRC39Q96DD0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC39Q96DD0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.62■□□□□ 0.89
LRRC39Q96DD0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC39Q96DD0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC39Q96DD0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC39Q96DD0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
LRRC39Q96DD0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.61■□□□□ 0.89
LRRC39Q96DD0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC39Q96DD0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms