Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCLNQ969V3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.76■□□□□ 0.75
NCLNQ969V3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.76■□□□□ 0.75
NCLNQ969V3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCLNQ969V3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.75■□□□□ 0.75
NCLNQ969V3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.75■□□□□ 0.75
NCLNQ969V3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCLNQ969V3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
NCLNQ969V3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.75■□□□□ 0.75
NCLNQ969V3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCLNQ969V3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCLNQ969V3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.75■□□□□ 0.75
NCLNQ969V3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NCLNQ969V3 AC016769.1-201ENST00000409132 1010 ntBASIC19.75■□□□□ 0.75
NCLNQ969V3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.75■□□□□ 0.75
NCLNQ969V3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCLNQ969V3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NCLNQ969V3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCLNQ969V3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
NCLNQ969V3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCLNQ969V3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NCLNQ969V3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCLNQ969V3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NCLNQ969V3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCLNQ969V3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.75■□□□□ 0.75
NCLNQ969V3 AC006128.1-201ENST00000624704 1661 ntBASIC19.75■□□□□ 0.75
NCLNQ969V3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCLNQ969V3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCLNQ969V3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
NCLNQ969V3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCLNQ969V3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
NCLNQ969V3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCLNQ969V3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NCLNQ969V3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCLNQ969V3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NCLNQ969V3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.74■□□□□ 0.75
NCLNQ969V3 EEF1DP3-203ENST00000566025 782 ntBASIC19.74■□□□□ 0.75
NCLNQ969V3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.74■□□□□ 0.75
NCLNQ969V3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.74■□□□□ 0.75
NCLNQ969V3 AP001160.3-201ENST00000601484 763 ntBASIC19.74■□□□□ 0.75
NCLNQ969V3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCLNQ969V3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.74■□□□□ 0.75
NCLNQ969V3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCLNQ969V3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCLNQ969V3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.74■□□□□ 0.75
NCLNQ969V3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
NCLNQ969V3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCLNQ969V3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.74■□□□□ 0.75
NCLNQ969V3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCLNQ969V3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NCLNQ969V3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCLNQ969V3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.73■□□□□ 0.75
NCLNQ969V3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCLNQ969V3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.73■□□□□ 0.75
NCLNQ969V3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NCLNQ969V3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCLNQ969V3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
NCLNQ969V3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.73■□□□□ 0.75
NCLNQ969V3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCLNQ969V3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCLNQ969V3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCLNQ969V3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCLNQ969V3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCLNQ969V3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCLNQ969V3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCLNQ969V3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCLNQ969V3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NCLNQ969V3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCLNQ969V3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCLNQ969V3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NCLNQ969V3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.72■□□□□ 0.75
NCLNQ969V3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCLNQ969V3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
NCLNQ969V3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCLNQ969V3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCLNQ969V3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
NCLNQ969V3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.72■□□□□ 0.75
NCLNQ969V3 AC004911.1-201ENST00000416316 871 ntBASIC19.72■□□□□ 0.75
NCLNQ969V3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.72■□□□□ 0.75
NCLNQ969V3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCLNQ969V3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.72■□□□□ 0.75
NCLNQ969V3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
NCLNQ969V3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.72■□□□□ 0.75
NCLNQ969V3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
NCLNQ969V3 AC138907.5-202ENST00000569484 235 ntBASIC19.72■□□□□ 0.75
NCLNQ969V3 AC053503.5-201ENST00000601508 636 ntBASIC19.72■□□□□ 0.75
NCLNQ969V3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCLNQ969V3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
NCLNQ969V3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NCLNQ969V3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NCLNQ969V3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCLNQ969V3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCLNQ969V3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCLNQ969V3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NCLNQ969V3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCLNQ969V3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCLNQ969V3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NCLNQ969V3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.71■□□□□ 0.75
NCLNQ969V3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NCLNQ969V3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms