Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP2A3Q93084 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
ATP2A3Q93084 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.5■■□□□ 1.03
ATP2A3Q93084 AC005229.4-201ENST00000610085 2198 ntBASIC21.5■■□□□ 1.03
ATP2A3Q93084 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
ATP2A3Q93084 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.49■■□□□ 1.03
ATP2A3Q93084 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP2A3Q93084 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP2A3Q93084 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
ATP2A3Q93084 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ATP2A3Q93084 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
ATP2A3Q93084 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.49■■□□□ 1.03
ATP2A3Q93084 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP2A3Q93084 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.49■■□□□ 1.03
ATP2A3Q93084 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.49■■□□□ 1.03
ATP2A3Q93084 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.49■■□□□ 1.03
ATP2A3Q93084 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.49■■□□□ 1.03
ATP2A3Q93084 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP2A3Q93084 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ATP2A3Q93084 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
ATP2A3Q93084 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
ATP2A3Q93084 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ATP2A3Q93084 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP2A3Q93084 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
ATP2A3Q93084 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP2A3Q93084 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP2A3Q93084 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP2A3Q93084 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.48■■□□□ 1.03
ATP2A3Q93084 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ATP2A3Q93084 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP2A3Q93084 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.48■■□□□ 1.03
ATP2A3Q93084 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP2A3Q93084 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
ATP2A3Q93084 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP2A3Q93084 Z98882.1-201ENST00000622160 2253 ntBASIC21.48■■□□□ 1.03
ATP2A3Q93084 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
ATP2A3Q93084 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP2A3Q93084 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP2A3Q93084 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP2A3Q93084 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
ATP2A3Q93084 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP2A3Q93084 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.47■■□□□ 1.03
ATP2A3Q93084 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.47■■□□□ 1.03
ATP2A3Q93084 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
ATP2A3Q93084 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.47■■□□□ 1.03
ATP2A3Q93084 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.47■■□□□ 1.03
ATP2A3Q93084 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
ATP2A3Q93084 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ATP2A3Q93084 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
ATP2A3Q93084 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.47■■□□□ 1.03
ATP2A3Q93084 AC100791.3-201ENST00000617619 330 ntBASIC21.47■■□□□ 1.03
ATP2A3Q93084 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP2A3Q93084 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
ATP2A3Q93084 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP2A3Q93084 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP2A3Q93084 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.47■■□□□ 1.03
ATP2A3Q93084 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.47■■□□□ 1.03
ATP2A3Q93084 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.46■■□□□ 1.03
ATP2A3Q93084 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATP2A3Q93084 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP2A3Q93084 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.46■■□□□ 1.03
ATP2A3Q93084 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.46■■□□□ 1.03
ATP2A3Q93084 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATP2A3Q93084 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
ATP2A3Q93084 AC008687.6-201ENST00000596318 630 ntBASIC21.46■■□□□ 1.03
ATP2A3Q93084 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP2A3Q93084 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.46■■□□□ 1.03
ATP2A3Q93084 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.46■■□□□ 1.03
ATP2A3Q93084 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP2A3Q93084 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATP2A3Q93084 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP2A3Q93084 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.46■■□□□ 1.03
ATP2A3Q93084 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.46■■□□□ 1.03
ATP2A3Q93084 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP2A3Q93084 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
ATP2A3Q93084 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATP2A3Q93084 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.45■■□□□ 1.02
ATP2A3Q93084 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATP2A3Q93084 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATP2A3Q93084 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.02
ATP2A3Q93084 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.45■■□□□ 1.02
ATP2A3Q93084 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.45■■□□□ 1.02
ATP2A3Q93084 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.45■■□□□ 1.02
ATP2A3Q93084 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ATP2A3Q93084 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.45■■□□□ 1.02
ATP2A3Q93084 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.45■■□□□ 1.02
ATP2A3Q93084 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ATP2A3Q93084 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.45■■□□□ 1.02
ATP2A3Q93084 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.45■■□□□ 1.02
ATP2A3Q93084 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.45■■□□□ 1.02
ATP2A3Q93084 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATP2A3Q93084 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATP2A3Q93084 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
ATP2A3Q93084 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.45■■□□□ 1.02
ATP2A3Q93084 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.45■■□□□ 1.02
ATP2A3Q93084 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATP2A3Q93084 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
ATP2A3Q93084 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATP2A3Q93084 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
ATP2A3Q93084 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms