Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP3S1Q92572 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AP3S1Q92572 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
AP3S1Q92572 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.02■□□□□ 0.48
AP3S1Q92572 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AP3S1Q92572 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.02■□□□□ 0.48
AP3S1Q92572 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.02■□□□□ 0.48
AP3S1Q92572 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
AP3S1Q92572 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP3S1Q92572 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
AP3S1Q92572 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
AP3S1Q92572 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.02■□□□□ 0.47
AP3S1Q92572 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.02■□□□□ 0.47
AP3S1Q92572 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
AP3S1Q92572 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.02■□□□□ 0.47
AP3S1Q92572 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
AP3S1Q92572 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP3S1Q92572 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP3S1Q92572 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP3S1Q92572 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP3S1Q92572 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP3S1Q92572 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP3S1Q92572 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
AP3S1Q92572 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.01■□□□□ 0.47
AP3S1Q92572 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.01■□□□□ 0.47
AP3S1Q92572 pRNA.6-201ENST00000610482 90 ntBASIC18.01■□□□□ 0.47
AP3S1Q92572 pRNA.5-201ENST00000612139 90 ntBASIC18.01■□□□□ 0.47
AP3S1Q92572 pRNA.11-201ENST00000618423 90 ntBASIC18.01■□□□□ 0.47
AP3S1Q92572 pRNA.13-201ENST00000619112 90 ntBASIC18.01■□□□□ 0.47
AP3S1Q92572 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
AP3S1Q92572 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.01■□□□□ 0.47
AP3S1Q92572 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.01■□□□□ 0.47
AP3S1Q92572 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
AP3S1Q92572 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.01■□□□□ 0.47
AP3S1Q92572 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.01■□□□□ 0.47
AP3S1Q92572 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
AP3S1Q92572 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP3S1Q92572 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
AP3S1Q92572 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP3S1Q92572 AL158211.5-201ENST00000623583 2518 ntBASIC18■□□□□ 0.47
AP3S1Q92572 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP3S1Q92572 OR2I1P-207ENST00000453522 948 ntBASIC18■□□□□ 0.47
AP3S1Q92572 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
AP3S1Q92572 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
AP3S1Q92572 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
AP3S1Q92572 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
AP3S1Q92572 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18■□□□□ 0.47
AP3S1Q92572 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18■□□□□ 0.47
AP3S1Q92572 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP3S1Q92572 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18■□□□□ 0.47
AP3S1Q92572 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
AP3S1Q92572 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP3S1Q92572 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
AP3S1Q92572 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP3S1Q92572 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP3S1Q92572 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
AP3S1Q92572 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP3S1Q92572 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
AP3S1Q92572 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.99■□□□□ 0.47
AP3S1Q92572 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
AP3S1Q92572 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
AP3S1Q92572 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP3S1Q92572 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
AP3S1Q92572 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP3S1Q92572 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP3S1Q92572 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
AP3S1Q92572 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
AP3S1Q92572 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
AP3S1Q92572 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.98■□□□□ 0.47
AP3S1Q92572 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP3S1Q92572 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP3S1Q92572 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP3S1Q92572 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP3S1Q92572 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
AP3S1Q92572 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.98■□□□□ 0.47
AP3S1Q92572 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.98■□□□□ 0.47
AP3S1Q92572 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
AP3S1Q92572 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.98■□□□□ 0.47
AP3S1Q92572 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP3S1Q92572 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.98■□□□□ 0.47
AP3S1Q92572 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
AP3S1Q92572 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
AP3S1Q92572 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
AP3S1Q92572 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
AP3S1Q92572 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP3S1Q92572 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP3S1Q92572 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP3S1Q92572 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP3S1Q92572 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
AP3S1Q92572 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3S1Q92572 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
AP3S1Q92572 AC125437.2-201ENST00000625180 2167 ntBASIC17.97■□□□□ 0.47
AP3S1Q92572 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3S1Q92572 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3S1Q92572 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3S1Q92572 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
AP3S1Q92572 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
AP3S1Q92572 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.97■□□□□ 0.47
AP3S1Q92572 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.97■□□□□ 0.47
AP3S1Q92572 BX664725.1-201ENST00000438252 379 ntBASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms