Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SHC3Q92529 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
SHC3Q92529 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHC3Q92529 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.88■■□□□ 1.09
SHC3Q92529 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHC3Q92529 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SHC3Q92529 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
SHC3Q92529 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SHC3Q92529 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHC3Q92529 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.87■■□□□ 1.09
SHC3Q92529 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHC3Q92529 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.87■■□□□ 1.09
SHC3Q92529 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHC3Q92529 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.87■■□□□ 1.09
SHC3Q92529 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.87■■□□□ 1.09
SHC3Q92529 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.87■■□□□ 1.09
SHC3Q92529 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SHC3Q92529 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHC3Q92529 AC092720.2-201ENST00000602388 1665 ntBASIC21.87■■□□□ 1.09
SHC3Q92529 KRT8P36-201ENST00000489121 1440 ntBASIC21.87■■□□□ 1.09
SHC3Q92529 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.87■■□□□ 1.09
SHC3Q92529 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.87■■□□□ 1.09
SHC3Q92529 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SHC3Q92529 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.86■■□□□ 1.09
SHC3Q92529 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.86■■□□□ 1.09
SHC3Q92529 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHC3Q92529 AL512408.1-201ENST00000569378 2000 ntBASIC21.86■■□□□ 1.09
SHC3Q92529 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHC3Q92529 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
SHC3Q92529 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHC3Q92529 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.86■■□□□ 1.09
SHC3Q92529 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHC3Q92529 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHC3Q92529 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.86■■□□□ 1.09
SHC3Q92529 BID-214ENST00000617586 542 ntTSL 5 BASIC21.86■■□□□ 1.09
SHC3Q92529 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
SHC3Q92529 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SHC3Q92529 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHC3Q92529 AC068338.2-201ENST00000563278 1430 ntBASIC21.86■■□□□ 1.09
SHC3Q92529 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHC3Q92529 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHC3Q92529 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHC3Q92529 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SHC3Q92529 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.86■■□□□ 1.09
SHC3Q92529 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.86■■□□□ 1.09
SHC3Q92529 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
SHC3Q92529 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHC3Q92529 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.85■■□□□ 1.09
SHC3Q92529 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHC3Q92529 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.85■■□□□ 1.09
SHC3Q92529 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
SHC3Q92529 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.85■■□□□ 1.09
SHC3Q92529 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
SHC3Q92529 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHC3Q92529 MIR935-201ENST00000401179 91 ntBASIC21.85■■□□□ 1.09
SHC3Q92529 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.85■■□□□ 1.09
SHC3Q92529 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.85■■□□□ 1.09
SHC3Q92529 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.85■■□□□ 1.09
SHC3Q92529 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHC3Q92529 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.85■■□□□ 1.09
SHC3Q92529 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.85■■□□□ 1.09
SHC3Q92529 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.85■■□□□ 1.09
SHC3Q92529 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SHC3Q92529 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SHC3Q92529 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SHC3Q92529 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.85■■□□□ 1.09
SHC3Q92529 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
SHC3Q92529 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHC3Q92529 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHC3Q92529 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHC3Q92529 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHC3Q92529 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHC3Q92529 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SHC3Q92529 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHC3Q92529 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
SHC3Q92529 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHC3Q92529 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHC3Q92529 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.84■■□□□ 1.09
SHC3Q92529 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SHC3Q92529 AC092437.1-201ENST00000624794 1048 ntBASIC21.84■■□□□ 1.09
SHC3Q92529 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHC3Q92529 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHC3Q92529 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SHC3Q92529 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHC3Q92529 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SHC3Q92529 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.84■■□□□ 1.09
SHC3Q92529 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.84■■□□□ 1.09
SHC3Q92529 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHC3Q92529 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHC3Q92529 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHC3Q92529 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
SHC3Q92529 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHC3Q92529 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHC3Q92529 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHC3Q92529 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHC3Q92529 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHC3Q92529 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHC3Q92529 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
SHC3Q92529 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.83■■□□□ 1.09
SHC3Q92529 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms