Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF138Q8WVD3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF138Q8WVD3 AC133041.1-202ENST00000642053 222 ntBASIC18.6■□□□□ 0.57
RNF138Q8WVD3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RNF138Q8WVD3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF138Q8WVD3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF138Q8WVD3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF138Q8WVD3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF138Q8WVD3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF138Q8WVD3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF138Q8WVD3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF138Q8WVD3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF138Q8WVD3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF138Q8WVD3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF138Q8WVD3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF138Q8WVD3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF138Q8WVD3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF138Q8WVD3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF138Q8WVD3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF138Q8WVD3 AL355802.2-201ENST00000402069 882 ntBASIC18.59■□□□□ 0.57
RNF138Q8WVD3 DUSP5P2-201ENST00000426873 1033 ntBASIC18.59■□□□□ 0.57
RNF138Q8WVD3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF138Q8WVD3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
RNF138Q8WVD3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF138Q8WVD3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF138Q8WVD3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
RNF138Q8WVD3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF138Q8WVD3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF138Q8WVD3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF138Q8WVD3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF138Q8WVD3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF138Q8WVD3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF138Q8WVD3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
RNF138Q8WVD3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.58■□□□□ 0.56
RNF138Q8WVD3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF138Q8WVD3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF138Q8WVD3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
RNF138Q8WVD3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF138Q8WVD3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF138Q8WVD3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
RNF138Q8WVD3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RNF138Q8WVD3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF138Q8WVD3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF138Q8WVD3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF138Q8WVD3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.57■□□□□ 0.56
RNF138Q8WVD3 FP700111.2-201ENST00000619190 1892 ntBASIC18.57■□□□□ 0.56
RNF138Q8WVD3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF138Q8WVD3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF138Q8WVD3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF138Q8WVD3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.57■□□□□ 0.56
RNF138Q8WVD3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF138Q8WVD3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.57■□□□□ 0.56
RNF138Q8WVD3 AC083880.1-201ENST00000608266 535 ntBASIC18.57■□□□□ 0.56
RNF138Q8WVD3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF138Q8WVD3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF138Q8WVD3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.57■□□□□ 0.56
RNF138Q8WVD3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF138Q8WVD3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RNF138Q8WVD3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF138Q8WVD3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF138Q8WVD3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF138Q8WVD3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF138Q8WVD3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF138Q8WVD3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF138Q8WVD3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF138Q8WVD3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF138Q8WVD3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.56■□□□□ 0.56
RNF138Q8WVD3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.56■□□□□ 0.56
RNF138Q8WVD3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.56■□□□□ 0.56
RNF138Q8WVD3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.56■□□□□ 0.56
RNF138Q8WVD3 C2orf69P4-201ENST00000565394 541 ntBASIC18.56■□□□□ 0.56
RNF138Q8WVD3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF138Q8WVD3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF138Q8WVD3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF138Q8WVD3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF138Q8WVD3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF138Q8WVD3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF138Q8WVD3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF138Q8WVD3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RNF138Q8WVD3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RNF138Q8WVD3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF138Q8WVD3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF138Q8WVD3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF138Q8WVD3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF138Q8WVD3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF138Q8WVD3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF138Q8WVD3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF138Q8WVD3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RNF138Q8WVD3 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF138Q8WVD3 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.55■□□□□ 0.56
RNF138Q8WVD3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF138Q8WVD3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF138Q8WVD3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF138Q8WVD3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RNF138Q8WVD3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF138Q8WVD3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RNF138Q8WVD3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF138Q8WVD3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
RNF138Q8WVD3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF138Q8WVD3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms