Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AC027702.1-201ENST00000563810 1770 ntBASIC20.71■□□□□ 0.91
PTCD2Q8WV60 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCD2Q8WV60 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
PTCD2Q8WV60 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCD2Q8WV60 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTCD2Q8WV60 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCD2Q8WV60 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.71■□□□□ 0.91
PTCD2Q8WV60 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PTCD2Q8WV60 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PTCD2Q8WV60 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCD2Q8WV60 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
PTCD2Q8WV60 AC073314.1-201ENST00000568729 2216 ntBASIC20.7■□□□□ 0.9
PTCD2Q8WV60 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PTCD2Q8WV60 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PTCD2Q8WV60 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PTCD2Q8WV60 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.7■□□□□ 0.9
PTCD2Q8WV60 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTCD2Q8WV60 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTCD2Q8WV60 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTCD2Q8WV60 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.7■□□□□ 0.9
PTCD2Q8WV60 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTCD2Q8WV60 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTCD2Q8WV60 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.7■□□□□ 0.9
PTCD2Q8WV60 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTCD2Q8WV60 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.7■□□□□ 0.9
PTCD2Q8WV60 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTCD2Q8WV60 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.7■□□□□ 0.9
PTCD2Q8WV60 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.7■□□□□ 0.9
PTCD2Q8WV60 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTCD2Q8WV60 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PTCD2Q8WV60 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTCD2Q8WV60 FP700111.2-201ENST00000619190 1892 ntBASIC20.69■□□□□ 0.9
PTCD2Q8WV60 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTCD2Q8WV60 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTCD2Q8WV60 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTCD2Q8WV60 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.69■□□□□ 0.9
PTCD2Q8WV60 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.69■□□□□ 0.9
PTCD2Q8WV60 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.69■□□□□ 0.9
PTCD2Q8WV60 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTCD2Q8WV60 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTCD2Q8WV60 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.69■□□□□ 0.9
PTCD2Q8WV60 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
PTCD2Q8WV60 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTCD2Q8WV60 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PTCD2Q8WV60 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTCD2Q8WV60 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTCD2Q8WV60 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTCD2Q8WV60 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.69■□□□□ 0.9
PTCD2Q8WV60 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTCD2Q8WV60 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTCD2Q8WV60 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTCD2Q8WV60 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.68■□□□□ 0.9
PTCD2Q8WV60 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.68■□□□□ 0.9
PTCD2Q8WV60 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTCD2Q8WV60 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.68■□□□□ 0.9
PTCD2Q8WV60 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PTCD2Q8WV60 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.68■□□□□ 0.9
PTCD2Q8WV60 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.68■□□□□ 0.9
PTCD2Q8WV60 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.68■□□□□ 0.9
PTCD2Q8WV60 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.68■□□□□ 0.9
PTCD2Q8WV60 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.68■□□□□ 0.9
PTCD2Q8WV60 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTCD2Q8WV60 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTCD2Q8WV60 RBM17P2-201ENST00000616397 1405 ntBASIC20.68■□□□□ 0.9
PTCD2Q8WV60 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTCD2Q8WV60 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PTCD2Q8WV60 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTCD2Q8WV60 AC020907.5-201ENST00000624372 1936 ntBASIC20.67■□□□□ 0.9
PTCD2Q8WV60 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.67■□□□□ 0.9
PTCD2Q8WV60 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.67■□□□□ 0.9
PTCD2Q8WV60 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.67■□□□□ 0.9
PTCD2Q8WV60 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.67■□□□□ 0.9
PTCD2Q8WV60 AC068338.2-201ENST00000563278 1430 ntBASIC20.67■□□□□ 0.9
PTCD2Q8WV60 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTCD2Q8WV60 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.66■□□□□ 0.9
PTCD2Q8WV60 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTCD2Q8WV60 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.66■□□□□ 0.9
PTCD2Q8WV60 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTCD2Q8WV60 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTCD2Q8WV60 GUSBP6-202ENST00000438529 1198 ntBASIC20.66■□□□□ 0.9
PTCD2Q8WV60 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PTCD2Q8WV60 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.66■□□□□ 0.9
PTCD2Q8WV60 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.66■□□□□ 0.9
PTCD2Q8WV60 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
PTCD2Q8WV60 AL109923.1-201ENST00000618799 583 ntBASIC20.66■□□□□ 0.9
PTCD2Q8WV60 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.66■□□□□ 0.9
PTCD2Q8WV60 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTCD2Q8WV60 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.66■□□□□ 0.9
PTCD2Q8WV60 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTCD2Q8WV60 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PTCD2Q8WV60 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTCD2Q8WV60 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTCD2Q8WV60 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
PTCD2Q8WV60 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PTCD2Q8WV60 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.65■□□□□ 0.9
PTCD2Q8WV60 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTCD2Q8WV60 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTCD2Q8WV60 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.65■□□□□ 0.9
PTCD2Q8WV60 AC091799.1-201ENST00000422823 811 ntBASIC20.65■□□□□ 0.9
PTCD2Q8WV60 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms