Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
RNF139Q8WU17 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF139Q8WU17 AC121338.2-201ENST00000622535 1744 ntBASIC21.47■■□□□ 1.03
RNF139Q8WU17 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.47■■□□□ 1.03
RNF139Q8WU17 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF139Q8WU17 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF139Q8WU17 AL138781.1-201ENST00000566567 1274 ntBASIC21.47■■□□□ 1.03
RNF139Q8WU17 MIR4758-201ENST00000577688 71 ntBASIC21.47■■□□□ 1.03
RNF139Q8WU17 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.47■■□□□ 1.03
RNF139Q8WU17 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.47■■□□□ 1.03
RNF139Q8WU17 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF139Q8WU17 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF139Q8WU17 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF139Q8WU17 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.46■■□□□ 1.03
RNF139Q8WU17 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF139Q8WU17 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF139Q8WU17 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
RNF139Q8WU17 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.46■■□□□ 1.03
RNF139Q8WU17 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF139Q8WU17 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF139Q8WU17 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF139Q8WU17 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF139Q8WU17 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF139Q8WU17 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF139Q8WU17 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.46■■□□□ 1.03
RNF139Q8WU17 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.46■■□□□ 1.03
RNF139Q8WU17 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.46■■□□□ 1.03
RNF139Q8WU17 AC142086.2-201ENST00000569753 217 ntBASIC21.46■■□□□ 1.03
RNF139Q8WU17 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.46■■□□□ 1.03
RNF139Q8WU17 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.46■■□□□ 1.03
RNF139Q8WU17 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF139Q8WU17 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
RNF139Q8WU17 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
RNF139Q8WU17 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF139Q8WU17 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
RNF139Q8WU17 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF139Q8WU17 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF139Q8WU17 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.45■■□□□ 1.02
RNF139Q8WU17 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF139Q8WU17 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF139Q8WU17 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
RNF139Q8WU17 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF139Q8WU17 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF139Q8WU17 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF139Q8WU17 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
RNF139Q8WU17 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RNF139Q8WU17 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF139Q8WU17 LSM12P1-201ENST00000411836 588 ntBASIC21.45■■□□□ 1.02
RNF139Q8WU17 AL355472.2-201ENST00000422958 438 ntBASIC21.45■■□□□ 1.02
RNF139Q8WU17 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.45■■□□□ 1.02
RNF139Q8WU17 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.45■■□□□ 1.02
RNF139Q8WU17 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
RNF139Q8WU17 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.45■■□□□ 1.02
RNF139Q8WU17 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF139Q8WU17 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF139Q8WU17 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.45■■□□□ 1.02
RNF139Q8WU17 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RNF139Q8WU17 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
RNF139Q8WU17 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
RNF139Q8WU17 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.45■■□□□ 1.02
RNF139Q8WU17 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF139Q8WU17 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF139Q8WU17 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.44■■□□□ 1.02
RNF139Q8WU17 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.44■■□□□ 1.02
RNF139Q8WU17 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.44■■□□□ 1.02
RNF139Q8WU17 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.44■■□□□ 1.02
RNF139Q8WU17 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
RNF139Q8WU17 CYP2T3P-201ENST00000601990 817 ntBASIC21.44■■□□□ 1.02
RNF139Q8WU17 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF139Q8WU17 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF139Q8WU17 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF139Q8WU17 PLK5-205ENST00000642079 1969 ntBASIC21.44■■□□□ 1.02
RNF139Q8WU17 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF139Q8WU17 CYP21A1P-202ENST00000354927 1481 ntBASIC21.44■■□□□ 1.02
RNF139Q8WU17 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF139Q8WU17 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF139Q8WU17 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF139Q8WU17 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF139Q8WU17 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RNF139Q8WU17 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
RNF139Q8WU17 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF139Q8WU17 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF139Q8WU17 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF139Q8WU17 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.43■■□□□ 1.02
RNF139Q8WU17 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.43■■□□□ 1.02
RNF139Q8WU17 AC133041.1-202ENST00000642053 222 ntBASIC21.43■■□□□ 1.02
RNF139Q8WU17 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF139Q8WU17 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
RNF139Q8WU17 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF139Q8WU17 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF139Q8WU17 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
RNF139Q8WU17 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF139Q8WU17 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.42■■□□□ 1.02
RNF139Q8WU17 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF139Q8WU17 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.42■■□□□ 1.02
RNF139Q8WU17 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF139Q8WU17 KRT18P68-201ENST00000392293 1000 ntBASIC21.42■■□□□ 1.02
RNF139Q8WU17 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.42■■□□□ 1.02
RNF139Q8WU17 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.42■■□□□ 1.02
RNF139Q8WU17 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms