Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPS4Y2Q8TD47 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RPS4Y2Q8TD47 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPS4Y2Q8TD47 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPS4Y2Q8TD47 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.91■□□□□ 0.46
RPS4Y2Q8TD47 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPS4Y2Q8TD47 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPS4Y2Q8TD47 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPS4Y2Q8TD47 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPS4Y2Q8TD47 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPS4Y2Q8TD47 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPS4Y2Q8TD47 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.91■□□□□ 0.46
RPS4Y2Q8TD47 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.91■□□□□ 0.46
RPS4Y2Q8TD47 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPS4Y2Q8TD47 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPS4Y2Q8TD47 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPS4Y2Q8TD47 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
RPS4Y2Q8TD47 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPS4Y2Q8TD47 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPS4Y2Q8TD47 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPS4Y2Q8TD47 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPS4Y2Q8TD47 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPS4Y2Q8TD47 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RPS4Y2Q8TD47 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RPS4Y2Q8TD47 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPS4Y2Q8TD47 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPS4Y2Q8TD47 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.9■□□□□ 0.46
RPS4Y2Q8TD47 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.9■□□□□ 0.46
RPS4Y2Q8TD47 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPS4Y2Q8TD47 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.9■□□□□ 0.46
RPS4Y2Q8TD47 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.9■□□□□ 0.46
RPS4Y2Q8TD47 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.9■□□□□ 0.46
RPS4Y2Q8TD47 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RPS4Y2Q8TD47 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.9■□□□□ 0.46
RPS4Y2Q8TD47 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RPS4Y2Q8TD47 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPS4Y2Q8TD47 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.89■□□□□ 0.46
RPS4Y2Q8TD47 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPS4Y2Q8TD47 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.89■□□□□ 0.45
RPS4Y2Q8TD47 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.89■□□□□ 0.45
RPS4Y2Q8TD47 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPS4Y2Q8TD47 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.89■□□□□ 0.45
RPS4Y2Q8TD47 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RPS4Y2Q8TD47 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RPS4Y2Q8TD47 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
RPS4Y2Q8TD47 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPS4Y2Q8TD47 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.89■□□□□ 0.45
RPS4Y2Q8TD47 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPS4Y2Q8TD47 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.89■□□□□ 0.45
RPS4Y2Q8TD47 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
RPS4Y2Q8TD47 AC008175.2-201ENST00000612840 297 ntBASIC17.89■□□□□ 0.45
RPS4Y2Q8TD47 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.89■□□□□ 0.45
RPS4Y2Q8TD47 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RPS4Y2Q8TD47 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.89■□□□□ 0.45
RPS4Y2Q8TD47 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RPS4Y2Q8TD47 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RPS4Y2Q8TD47 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPS4Y2Q8TD47 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
RPS4Y2Q8TD47 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RPS4Y2Q8TD47 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPS4Y2Q8TD47 BX323043.1-201ENST00000641006 1765 ntBASIC17.89■□□□□ 0.45
RPS4Y2Q8TD47 KRT16P2-201ENST00000414673 1423 ntBASIC17.89■□□□□ 0.45
RPS4Y2Q8TD47 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.88■□□□□ 0.45
RPS4Y2Q8TD47 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPS4Y2Q8TD47 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.88■□□□□ 0.45
RPS4Y2Q8TD47 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
RPS4Y2Q8TD47 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RPS4Y2Q8TD47 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPS4Y2Q8TD47 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RPS4Y2Q8TD47 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPS4Y2Q8TD47 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RPS4Y2Q8TD47 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPS4Y2Q8TD47 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.88■□□□□ 0.45
RPS4Y2Q8TD47 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPS4Y2Q8TD47 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPS4Y2Q8TD47 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.88■□□□□ 0.45
RPS4Y2Q8TD47 AC091305.1-201ENST00000479476 895 ntBASIC17.88■□□□□ 0.45
RPS4Y2Q8TD47 AP001330.3-201ENST00000520123 633 ntBASIC17.88■□□□□ 0.45
RPS4Y2Q8TD47 AF213884.3-201ENST00000563833 479 ntBASIC17.88■□□□□ 0.45
RPS4Y2Q8TD47 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.88■□□□□ 0.45
RPS4Y2Q8TD47 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RPS4Y2Q8TD47 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.88■□□□□ 0.45
RPS4Y2Q8TD47 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RPS4Y2Q8TD47 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPS4Y2Q8TD47 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RPS4Y2Q8TD47 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RPS4Y2Q8TD47 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RPS4Y2Q8TD47 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPS4Y2Q8TD47 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.87■□□□□ 0.45
RPS4Y2Q8TD47 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPS4Y2Q8TD47 SUDS3P1-201ENST00000505831 966 ntBASIC17.87■□□□□ 0.45
RPS4Y2Q8TD47 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.87■□□□□ 0.45
RPS4Y2Q8TD47 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RPS4Y2Q8TD47 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPS4Y2Q8TD47 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPS4Y2Q8TD47 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPS4Y2Q8TD47 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPS4Y2Q8TD47 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
RPS4Y2Q8TD47 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.87■□□□□ 0.45
RPS4Y2Q8TD47 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms