Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SETD9Q8NE22 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.76■□□□□ 0.59
SETD9Q8NE22 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.76■□□□□ 0.59
SETD9Q8NE22 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.76■□□□□ 0.59
SETD9Q8NE22 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SETD9Q8NE22 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SETD9Q8NE22 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SETD9Q8NE22 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SETD9Q8NE22 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.76■□□□□ 0.59
SETD9Q8NE22 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.76■□□□□ 0.59
SETD9Q8NE22 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.76■□□□□ 0.59
SETD9Q8NE22 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SETD9Q8NE22 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SETD9Q8NE22 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.75■□□□□ 0.59
SETD9Q8NE22 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SETD9Q8NE22 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.75■□□□□ 0.59
SETD9Q8NE22 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SETD9Q8NE22 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SETD9Q8NE22 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SETD9Q8NE22 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SETD9Q8NE22 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.75■□□□□ 0.59
SETD9Q8NE22 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SETD9Q8NE22 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SETD9Q8NE22 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.75■□□□□ 0.59
SETD9Q8NE22 AC092171.4-201ENST00000609130 632 ntBASIC18.75■□□□□ 0.59
SETD9Q8NE22 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SETD9Q8NE22 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SETD9Q8NE22 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SETD9Q8NE22 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SETD9Q8NE22 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SETD9Q8NE22 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.75■□□□□ 0.59
SETD9Q8NE22 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.75■□□□□ 0.59
SETD9Q8NE22 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SETD9Q8NE22 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SETD9Q8NE22 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
SETD9Q8NE22 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SETD9Q8NE22 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SETD9Q8NE22 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
SETD9Q8NE22 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SETD9Q8NE22 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SETD9Q8NE22 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SETD9Q8NE22 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SETD9Q8NE22 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.74■□□□□ 0.59
SETD9Q8NE22 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.74■□□□□ 0.59
SETD9Q8NE22 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SETD9Q8NE22 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SETD9Q8NE22 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.74■□□□□ 0.59
SETD9Q8NE22 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.74■□□□□ 0.59
SETD9Q8NE22 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.74■□□□□ 0.59
SETD9Q8NE22 AL033527.3-201ENST00000566366 1196 ntBASIC18.74■□□□□ 0.59
SETD9Q8NE22 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SETD9Q8NE22 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.74■□□□□ 0.59
SETD9Q8NE22 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SETD9Q8NE22 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SETD9Q8NE22 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SETD9Q8NE22 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SETD9Q8NE22 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SETD9Q8NE22 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SETD9Q8NE22 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SETD9Q8NE22 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SETD9Q8NE22 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SETD9Q8NE22 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
SETD9Q8NE22 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SETD9Q8NE22 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
SETD9Q8NE22 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SETD9Q8NE22 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SETD9Q8NE22 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SETD9Q8NE22 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SETD9Q8NE22 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
SETD9Q8NE22 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SETD9Q8NE22 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.73■□□□□ 0.59
SETD9Q8NE22 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SETD9Q8NE22 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SETD9Q8NE22 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SETD9Q8NE22 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SETD9Q8NE22 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SETD9Q8NE22 AL158211.5-201ENST00000623583 2518 ntBASIC18.73■□□□□ 0.59
SETD9Q8NE22 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SETD9Q8NE22 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
SETD9Q8NE22 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SETD9Q8NE22 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SETD9Q8NE22 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SETD9Q8NE22 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SETD9Q8NE22 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SETD9Q8NE22 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SETD9Q8NE22 AC125437.2-201ENST00000625180 2167 ntBASIC18.72■□□□□ 0.59
SETD9Q8NE22 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SETD9Q8NE22 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SETD9Q8NE22 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SETD9Q8NE22 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SETD9Q8NE22 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.72■□□□□ 0.59
SETD9Q8NE22 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SETD9Q8NE22 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.72■□□□□ 0.59
SETD9Q8NE22 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.72■□□□□ 0.59
SETD9Q8NE22 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SETD9Q8NE22 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SETD9Q8NE22 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SETD9Q8NE22 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SETD9Q8NE22 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SETD9Q8NE22 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms