Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.25■□□□□ 0.67
SIMC1Q8NDZ2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SIMC1Q8NDZ2 AL137784.2-201ENST00000607332 1000 ntBASIC19.25■□□□□ 0.67
SIMC1Q8NDZ2 BID-214ENST00000617586 542 ntTSL 5 BASIC19.25■□□□□ 0.67
SIMC1Q8NDZ2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIMC1Q8NDZ2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SIMC1Q8NDZ2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIMC1Q8NDZ2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIMC1Q8NDZ2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SIMC1Q8NDZ2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SIMC1Q8NDZ2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.25■□□□□ 0.67
SIMC1Q8NDZ2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SIMC1Q8NDZ2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SIMC1Q8NDZ2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
SIMC1Q8NDZ2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SIMC1Q8NDZ2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SIMC1Q8NDZ2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIMC1Q8NDZ2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIMC1Q8NDZ2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.24■□□□□ 0.67
SIMC1Q8NDZ2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SIMC1Q8NDZ2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
SIMC1Q8NDZ2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.24■□□□□ 0.67
SIMC1Q8NDZ2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.24■□□□□ 0.67
SIMC1Q8NDZ2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIMC1Q8NDZ2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIMC1Q8NDZ2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
SIMC1Q8NDZ2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SIMC1Q8NDZ2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIMC1Q8NDZ2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.24■□□□□ 0.67
SIMC1Q8NDZ2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIMC1Q8NDZ2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SIMC1Q8NDZ2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIMC1Q8NDZ2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SIMC1Q8NDZ2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIMC1Q8NDZ2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SIMC1Q8NDZ2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIMC1Q8NDZ2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.23■□□□□ 0.67
SIMC1Q8NDZ2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SIMC1Q8NDZ2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.23■□□□□ 0.67
SIMC1Q8NDZ2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SIMC1Q8NDZ2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.23■□□□□ 0.67
SIMC1Q8NDZ2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SIMC1Q8NDZ2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.23■□□□□ 0.67
SIMC1Q8NDZ2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SIMC1Q8NDZ2 AC116050.2-201ENST00000612102 1779 ntBASIC19.23■□□□□ 0.67
SIMC1Q8NDZ2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIMC1Q8NDZ2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.23■□□□□ 0.67
SIMC1Q8NDZ2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.23■□□□□ 0.67
SIMC1Q8NDZ2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
SIMC1Q8NDZ2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SIMC1Q8NDZ2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SIMC1Q8NDZ2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 AC016405.3-201ENST00000607710 860 ntBASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.22■□□□□ 0.67
SIMC1Q8NDZ2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SIMC1Q8NDZ2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.21■□□□□ 0.67
SIMC1Q8NDZ2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SIMC1Q8NDZ2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SIMC1Q8NDZ2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.21■□□□□ 0.67
SIMC1Q8NDZ2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIMC1Q8NDZ2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIMC1Q8NDZ2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SIMC1Q8NDZ2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SIMC1Q8NDZ2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SIMC1Q8NDZ2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIMC1Q8NDZ2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.21■□□□□ 0.67
SIMC1Q8NDZ2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.21■□□□□ 0.67
SIMC1Q8NDZ2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.21■□□□□ 0.67
SIMC1Q8NDZ2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SIMC1Q8NDZ2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
SIMC1Q8NDZ2 AC080038.1-201ENST00000611274 1154 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms