Protein–RNA interactions for Protein: Q8N752

CSNK1A1L, Casein kinase I isoform alpha-like, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1LQ8N752 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1A1LQ8N752 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
CSNK1A1LQ8N752 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1A1LQ8N752 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.5■□□□□ 0.71
CSNK1A1LQ8N752 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1A1LQ8N752 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1A1LQ8N752 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CSNK1A1LQ8N752 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.5■□□□□ 0.71
CSNK1A1LQ8N752 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.5■□□□□ 0.71
CSNK1A1LQ8N752 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.5■□□□□ 0.71
CSNK1A1LQ8N752 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.5■□□□□ 0.71
CSNK1A1LQ8N752 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.5■□□□□ 0.71
CSNK1A1LQ8N752 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.5■□□□□ 0.71
CSNK1A1LQ8N752 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.5■□□□□ 0.71
CSNK1A1LQ8N752 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1A1LQ8N752 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1A1LQ8N752 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1A1LQ8N752 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.5■□□□□ 0.71
CSNK1A1LQ8N752 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1A1LQ8N752 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1A1LQ8N752 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1A1LQ8N752 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1A1LQ8N752 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.49■□□□□ 0.71
CSNK1A1LQ8N752 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1A1LQ8N752 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CSNK1A1LQ8N752 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1A1LQ8N752 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CSNK1A1LQ8N752 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1A1LQ8N752 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1A1LQ8N752 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.49■□□□□ 0.71
CSNK1A1LQ8N752 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.49■□□□□ 0.71
CSNK1A1LQ8N752 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.49■□□□□ 0.71
CSNK1A1LQ8N752 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CSNK1A1LQ8N752 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1A1LQ8N752 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1A1LQ8N752 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1A1LQ8N752 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1A1LQ8N752 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.49■□□□□ 0.71
CSNK1A1LQ8N752 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1A1LQ8N752 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1A1LQ8N752 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK1A1LQ8N752 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK1A1LQ8N752 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK1A1LQ8N752 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK1A1LQ8N752 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK1A1LQ8N752 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK1A1LQ8N752 AC073210.2-201ENST00000430369 194 ntBASIC19.48■□□□□ 0.71
CSNK1A1LQ8N752 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.48■□□□□ 0.71
CSNK1A1LQ8N752 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.48■□□□□ 0.71
CSNK1A1LQ8N752 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.48■□□□□ 0.71
CSNK1A1LQ8N752 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK1A1LQ8N752 AC105020.6-201ENST00000621523 1217 ntBASIC19.48■□□□□ 0.71
CSNK1A1LQ8N752 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CSNK1A1LQ8N752 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK1A1LQ8N752 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.48■□□□□ 0.71
CSNK1A1LQ8N752 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.48■□□□□ 0.71
CSNK1A1LQ8N752 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CSNK1A1LQ8N752 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK1A1LQ8N752 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK1A1LQ8N752 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK1A1LQ8N752 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CSNK1A1LQ8N752 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CSNK1A1LQ8N752 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CSNK1A1LQ8N752 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK1A1LQ8N752 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.47■□□□□ 0.71
CSNK1A1LQ8N752 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.47■□□□□ 0.71
CSNK1A1LQ8N752 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK1A1LQ8N752 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.47■□□□□ 0.71
CSNK1A1LQ8N752 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.47■□□□□ 0.71
CSNK1A1LQ8N752 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CSNK1A1LQ8N752 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK1A1LQ8N752 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK1A1LQ8N752 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK1A1LQ8N752 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK1A1LQ8N752 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CSNK1A1LQ8N752 AL137060.1-201ENST00000618151 2648 ntBASIC19.47■□□□□ 0.71
CSNK1A1LQ8N752 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK1A1LQ8N752 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK1A1LQ8N752 AC006128.1-201ENST00000624704 1661 ntBASIC19.46■□□□□ 0.71
CSNK1A1LQ8N752 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1A1LQ8N752 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.46■□□□□ 0.71
CSNK1A1LQ8N752 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1A1LQ8N752 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.46■□□□□ 0.71
CSNK1A1LQ8N752 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1A1LQ8N752 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CSNK1A1LQ8N752 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1A1LQ8N752 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.46■□□□□ 0.71
CSNK1A1LQ8N752 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.46■□□□□ 0.71
CSNK1A1LQ8N752 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1A1LQ8N752 DUSP5P2-201ENST00000426873 1033 ntBASIC19.46■□□□□ 0.71
CSNK1A1LQ8N752 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.46■□□□□ 0.71
CSNK1A1LQ8N752 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.46■□□□□ 0.71
CSNK1A1LQ8N752 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.46■□□□□ 0.71
CSNK1A1LQ8N752 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.46■□□□□ 0.71
CSNK1A1LQ8N752 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.46■□□□□ 0.71
CSNK1A1LQ8N752 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.46■□□□□ 0.71
CSNK1A1LQ8N752 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.46■□□□□ 0.71
CSNK1A1LQ8N752 AL356652.1-201ENST00000615962 565 ntBASIC19.46■□□□□ 0.71
CSNK1A1LQ8N752 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.46■□□□□ 0.71
CSNK1A1LQ8N752 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms