Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL27A1Q8IZC6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
COL27A1Q8IZC6 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.48■□□□□ 0.71
COL27A1Q8IZC6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.48■□□□□ 0.71
COL27A1Q8IZC6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
COL27A1Q8IZC6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL27A1Q8IZC6 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.48■□□□□ 0.71
COL27A1Q8IZC6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL27A1Q8IZC6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.48■□□□□ 0.71
COL27A1Q8IZC6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
COL27A1Q8IZC6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL27A1Q8IZC6 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
COL27A1Q8IZC6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.48■□□□□ 0.71
COL27A1Q8IZC6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL27A1Q8IZC6 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.48■□□□□ 0.71
COL27A1Q8IZC6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.48■□□□□ 0.71
COL27A1Q8IZC6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL27A1Q8IZC6 MIR1224-201ENST00000408193 85 ntBASIC19.48■□□□□ 0.71
COL27A1Q8IZC6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.48■□□□□ 0.71
COL27A1Q8IZC6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.48■□□□□ 0.71
COL27A1Q8IZC6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.48■□□□□ 0.71
COL27A1Q8IZC6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.48■□□□□ 0.71
COL27A1Q8IZC6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.48■□□□□ 0.71
COL27A1Q8IZC6 AC006557.6-201ENST00000623071 864 ntBASIC19.48■□□□□ 0.71
COL27A1Q8IZC6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL27A1Q8IZC6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL27A1Q8IZC6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL27A1Q8IZC6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.47■□□□□ 0.71
COL27A1Q8IZC6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL27A1Q8IZC6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL27A1Q8IZC6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL27A1Q8IZC6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL27A1Q8IZC6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL27A1Q8IZC6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL27A1Q8IZC6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL27A1Q8IZC6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.47■□□□□ 0.71
COL27A1Q8IZC6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.47■□□□□ 0.71
COL27A1Q8IZC6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL27A1Q8IZC6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.47■□□□□ 0.71
COL27A1Q8IZC6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.47■□□□□ 0.71
COL27A1Q8IZC6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.47■□□□□ 0.71
COL27A1Q8IZC6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.47■□□□□ 0.71
COL27A1Q8IZC6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.47■□□□□ 0.71
COL27A1Q8IZC6 REXO1L12P-201ENST00000622156 912 ntBASIC19.47■□□□□ 0.71
COL27A1Q8IZC6 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.47■□□□□ 0.71
COL27A1Q8IZC6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL27A1Q8IZC6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL27A1Q8IZC6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.47■□□□□ 0.71
COL27A1Q8IZC6 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL27A1Q8IZC6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL27A1Q8IZC6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
COL27A1Q8IZC6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL27A1Q8IZC6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL27A1Q8IZC6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
COL27A1Q8IZC6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL27A1Q8IZC6 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.46■□□□□ 0.71
COL27A1Q8IZC6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.46■□□□□ 0.71
COL27A1Q8IZC6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.46■□□□□ 0.71
COL27A1Q8IZC6 MIR4785-201ENST00000585005 73 ntBASIC19.46■□□□□ 0.71
COL27A1Q8IZC6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
COL27A1Q8IZC6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
COL27A1Q8IZC6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL27A1Q8IZC6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL27A1Q8IZC6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL27A1Q8IZC6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.45■□□□□ 0.7
COL27A1Q8IZC6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.45■□□□□ 0.7
COL27A1Q8IZC6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.45■□□□□ 0.7
COL27A1Q8IZC6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL27A1Q8IZC6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL27A1Q8IZC6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
COL27A1Q8IZC6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL27A1Q8IZC6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.45■□□□□ 0.7
COL27A1Q8IZC6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL27A1Q8IZC6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL27A1Q8IZC6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL27A1Q8IZC6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
COL27A1Q8IZC6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.45■□□□□ 0.7
COL27A1Q8IZC6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.45■□□□□ 0.7
COL27A1Q8IZC6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL27A1Q8IZC6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL27A1Q8IZC6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
COL27A1Q8IZC6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL27A1Q8IZC6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.45■□□□□ 0.7
COL27A1Q8IZC6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL27A1Q8IZC6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
COL27A1Q8IZC6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
COL27A1Q8IZC6 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.45■□□□□ 0.7
COL27A1Q8IZC6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL27A1Q8IZC6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL27A1Q8IZC6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.45■□□□□ 0.7
COL27A1Q8IZC6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL27A1Q8IZC6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL27A1Q8IZC6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL27A1Q8IZC6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.44■□□□□ 0.7
COL27A1Q8IZC6 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.44■□□□□ 0.7
COL27A1Q8IZC6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.44■□□□□ 0.7
COL27A1Q8IZC6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.44■□□□□ 0.7
COL27A1Q8IZC6 AC097493.4-201ENST00000641197 219 ntBASIC19.44■□□□□ 0.7
COL27A1Q8IZC6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL27A1Q8IZC6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms