Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.62■■□□□ 1.05
SCN4BQ8IWT1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SCN4BQ8IWT1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCN4BQ8IWT1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCN4BQ8IWT1 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCN4BQ8IWT1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCN4BQ8IWT1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
SCN4BQ8IWT1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.62■■□□□ 1.05
SCN4BQ8IWT1 AC105020.6-201ENST00000621523 1217 ntBASIC21.62■■□□□ 1.05
SCN4BQ8IWT1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SCN4BQ8IWT1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCN4BQ8IWT1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.62■■□□□ 1.05
SCN4BQ8IWT1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCN4BQ8IWT1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SCN4BQ8IWT1 FEM1AP4-201ENST00000443167 1987 ntBASIC21.61■■□□□ 1.05
SCN4BQ8IWT1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCN4BQ8IWT1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SCN4BQ8IWT1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SCN4BQ8IWT1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.61■■□□□ 1.05
SCN4BQ8IWT1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.61■■□□□ 1.05
SCN4BQ8IWT1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCN4BQ8IWT1 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCN4BQ8IWT1 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCN4BQ8IWT1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCN4BQ8IWT1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.61■■□□□ 1.05
SCN4BQ8IWT1 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.61■■□□□ 1.05
SCN4BQ8IWT1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SCN4BQ8IWT1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.61■■□□□ 1.05
SCN4BQ8IWT1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.61■■□□□ 1.05
SCN4BQ8IWT1 TMEM191A-211ENST00000637163 1067 ntBASIC21.61■■□□□ 1.05
SCN4BQ8IWT1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SCN4BQ8IWT1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SCN4BQ8IWT1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.61■■□□□ 1.05
SCN4BQ8IWT1 AF106564.1-201ENST00000607058 2553 ntBASIC21.61■■□□□ 1.05
SCN4BQ8IWT1 AC087633.2-202ENST00000565166 1439 ntBASIC21.61■■□□□ 1.05
SCN4BQ8IWT1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCN4BQ8IWT1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCN4BQ8IWT1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.61■■□□□ 1.05
SCN4BQ8IWT1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.6■■□□□ 1.05
SCN4BQ8IWT1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCN4BQ8IWT1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCN4BQ8IWT1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCN4BQ8IWT1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.6■■□□□ 1.05
SCN4BQ8IWT1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SCN4BQ8IWT1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCN4BQ8IWT1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCN4BQ8IWT1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCN4BQ8IWT1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCN4BQ8IWT1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.6■■□□□ 1.05
SCN4BQ8IWT1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCN4BQ8IWT1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.6■■□□□ 1.05
SCN4BQ8IWT1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.6■■□□□ 1.05
SCN4BQ8IWT1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCN4BQ8IWT1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SCN4BQ8IWT1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCN4BQ8IWT1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.6■■□□□ 1.05
SCN4BQ8IWT1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCN4BQ8IWT1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCN4BQ8IWT1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.6■■□□□ 1.05
SCN4BQ8IWT1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SCN4BQ8IWT1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCN4BQ8IWT1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.59■■□□□ 1.05
SCN4BQ8IWT1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.59■■□□□ 1.05
SCN4BQ8IWT1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.59■■□□□ 1.05
SCN4BQ8IWT1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCN4BQ8IWT1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCN4BQ8IWT1 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.59■■□□□ 1.05
SCN4BQ8IWT1 PGM5P4-201ENST00000421970 445 ntBASIC21.59■■□□□ 1.05
SCN4BQ8IWT1 POU5F1P3-201ENST00000428824 1078 ntBASIC21.59■■□□□ 1.05
SCN4BQ8IWT1 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.59■■□□□ 1.05
SCN4BQ8IWT1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.59■■□□□ 1.05
SCN4BQ8IWT1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
SCN4BQ8IWT1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
SCN4BQ8IWT1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SCN4BQ8IWT1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.59■■□□□ 1.05
SCN4BQ8IWT1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCN4BQ8IWT1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SCN4BQ8IWT1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SCN4BQ8IWT1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SCN4BQ8IWT1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SCN4BQ8IWT1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SCN4BQ8IWT1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SCN4BQ8IWT1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SCN4BQ8IWT1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SCN4BQ8IWT1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.58■■□□□ 1.05
SCN4BQ8IWT1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.58■■□□□ 1.05
SCN4BQ8IWT1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.58■■□□□ 1.05
SCN4BQ8IWT1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.58■■□□□ 1.05
SCN4BQ8IWT1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SCN4BQ8IWT1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.58■■□□□ 1.05
SCN4BQ8IWT1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.58■■□□□ 1.05
SCN4BQ8IWT1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SCN4BQ8IWT1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.58■■□□□ 1.05
SCN4BQ8IWT1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SCN4BQ8IWT1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.58■■□□□ 1.04
SCN4BQ8IWT1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
SCN4BQ8IWT1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SCN4BQ8IWT1 AC121338.2-201ENST00000622535 1744 ntBASIC21.58■■□□□ 1.04
SCN4BQ8IWT1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SCN4BQ8IWT1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms