Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ECEL1P3-201ENST00000427961 737 ntBASIC22.08■■□□□ 1.13
NPAS4Q8IUM7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.08■■□□□ 1.13
NPAS4Q8IUM7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
NPAS4Q8IUM7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC22.08■■□□□ 1.13
NPAS4Q8IUM7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC22.08■■□□□ 1.13
NPAS4Q8IUM7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
NPAS4Q8IUM7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.08■■□□□ 1.13
NPAS4Q8IUM7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.08■■□□□ 1.13
NPAS4Q8IUM7 AC110285.5-201ENST00000611501 352 ntBASIC22.08■■□□□ 1.13
NPAS4Q8IUM7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.08■■□□□ 1.13
NPAS4Q8IUM7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
NPAS4Q8IUM7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
NPAS4Q8IUM7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
NPAS4Q8IUM7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NPAS4Q8IUM7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NPAS4Q8IUM7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
NPAS4Q8IUM7 KRASP1-201ENST00000407852 552 ntBASIC22.07■■□□□ 1.12
NPAS4Q8IUM7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.07■■□□□ 1.12
NPAS4Q8IUM7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC22.07■■□□□ 1.12
NPAS4Q8IUM7 AP001412.1-201ENST00000608405 714 ntBASIC22.07■■□□□ 1.12
NPAS4Q8IUM7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
NPAS4Q8IUM7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
NPAS4Q8IUM7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
NPAS4Q8IUM7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NPAS4Q8IUM7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NPAS4Q8IUM7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.07■■□□□ 1.12
NPAS4Q8IUM7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.07■■□□□ 1.12
NPAS4Q8IUM7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.07■■□□□ 1.12
NPAS4Q8IUM7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NPAS4Q8IUM7 KRT17P2-201ENST00000300992 1314 ntBASIC22.06■■□□□ 1.12
NPAS4Q8IUM7 AL135905.2-201ENST00000584934 1404 ntBASIC22.06■■□□□ 1.12
NPAS4Q8IUM7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NPAS4Q8IUM7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NPAS4Q8IUM7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
NPAS4Q8IUM7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
NPAS4Q8IUM7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.06■■□□□ 1.12
NPAS4Q8IUM7 AC211429.1-201ENST00000415277 523 ntBASIC22.06■■□□□ 1.12
NPAS4Q8IUM7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
NPAS4Q8IUM7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC22.06■■□□□ 1.12
NPAS4Q8IUM7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NPAS4Q8IUM7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.06■■□□□ 1.12
NPAS4Q8IUM7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.06■■□□□ 1.12
NPAS4Q8IUM7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
NPAS4Q8IUM7 AL049637.2-201ENST00000641778 930 ntBASIC22.06■■□□□ 1.12
NPAS4Q8IUM7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
NPAS4Q8IUM7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NPAS4Q8IUM7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NPAS4Q8IUM7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.06■■□□□ 1.12
NPAS4Q8IUM7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
NPAS4Q8IUM7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NPAS4Q8IUM7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
NPAS4Q8IUM7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NPAS4Q8IUM7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.06■■□□□ 1.12
NPAS4Q8IUM7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NPAS4Q8IUM7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NPAS4Q8IUM7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
NPAS4Q8IUM7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
NPAS4Q8IUM7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
NPAS4Q8IUM7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NPAS4Q8IUM7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
NPAS4Q8IUM7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
NPAS4Q8IUM7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC22.05■■□□□ 1.12
NPAS4Q8IUM7 TSPY7P-201ENST00000431358 1114 ntBASIC22.05■■□□□ 1.12
NPAS4Q8IUM7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC22.05■■□□□ 1.12
NPAS4Q8IUM7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC22.05■■□□□ 1.12
NPAS4Q8IUM7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
NPAS4Q8IUM7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC22.05■■□□□ 1.12
NPAS4Q8IUM7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC22.05■■□□□ 1.12
NPAS4Q8IUM7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
NPAS4Q8IUM7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
NPAS4Q8IUM7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NPAS4Q8IUM7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
NPAS4Q8IUM7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
NPAS4Q8IUM7 AC233723.2-201ENST00000623798 2106 ntBASIC22.04■■□□□ 1.12
NPAS4Q8IUM7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NPAS4Q8IUM7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
NPAS4Q8IUM7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
NPAS4Q8IUM7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NPAS4Q8IUM7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC22.04■■□□□ 1.12
NPAS4Q8IUM7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.04■■□□□ 1.12
NPAS4Q8IUM7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC22.04■■□□□ 1.12
NPAS4Q8IUM7 BX088651.1-201ENST00000540551 451 ntBASIC22.04■■□□□ 1.12
NPAS4Q8IUM7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
NPAS4Q8IUM7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NPAS4Q8IUM7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.04■■□□□ 1.12
NPAS4Q8IUM7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
NPAS4Q8IUM7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.04■■□□□ 1.12
NPAS4Q8IUM7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NPAS4Q8IUM7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.04■■□□□ 1.12
NPAS4Q8IUM7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NPAS4Q8IUM7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
NPAS4Q8IUM7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NPAS4Q8IUM7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NPAS4Q8IUM7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.04■■□□□ 1.12
NPAS4Q8IUM7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.04■■□□□ 1.12
NPAS4Q8IUM7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.03■■□□□ 1.12
NPAS4Q8IUM7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
NPAS4Q8IUM7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.03■■□□□ 1.12
NPAS4Q8IUM7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.03■■□□□ 1.12
NPAS4Q8IUM7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms