Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AC073508.3-201ENST00000619697 1419 ntBASIC25.97■■□□□ 1.75
COL23A1Q86Y22 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
COL23A1Q86Y22 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
COL23A1Q86Y22 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC25.96■■□□□ 1.75
COL23A1Q86Y22 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
COL23A1Q86Y22 TERF1P1-201ENST00000311003 1181 ntBASIC25.96■■□□□ 1.75
COL23A1Q86Y22 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
COL23A1Q86Y22 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
COL23A1Q86Y22 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
COL23A1Q86Y22 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
COL23A1Q86Y22 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC25.96■■□□□ 1.75
COL23A1Q86Y22 KRT16P5-201ENST00000455284 522 ntBASIC25.96■■□□□ 1.75
COL23A1Q86Y22 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC25.96■■□□□ 1.75
COL23A1Q86Y22 NTF6B-201ENST00000591913 560 ntBASIC25.96■■□□□ 1.75
COL23A1Q86Y22 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC25.96■■□□□ 1.75
COL23A1Q86Y22 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC25.96■■□□□ 1.75
COL23A1Q86Y22 GLDC-219ENST00000640208 420 ntTSL 2 BASIC25.96■■□□□ 1.75
COL23A1Q86Y22 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
COL23A1Q86Y22 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC25.96■■□□□ 1.75
COL23A1Q86Y22 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC25.96■■□□□ 1.75
COL23A1Q86Y22 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC25.96■■□□□ 1.75
COL23A1Q86Y22 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
COL23A1Q86Y22 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
COL23A1Q86Y22 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
COL23A1Q86Y22 LINC01568-207ENST00000641790 1380 ntBASIC25.95■■□□□ 1.75
COL23A1Q86Y22 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
COL23A1Q86Y22 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
COL23A1Q86Y22 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC25.95■■□□□ 1.74
COL23A1Q86Y22 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC25.95■■□□□ 1.74
COL23A1Q86Y22 FDX2-207ENST00000494368 584 ntTSL 4 BASIC25.95■■□□□ 1.74
COL23A1Q86Y22 CFL2-205ENST00000555765 632 ntTSL 2 BASIC25.95■■□□□ 1.74
COL23A1Q86Y22 REXO1L10P-201ENST00000615707 1290 ntBASIC25.95■■□□□ 1.74
COL23A1Q86Y22 DECR2-212ENST00000627716 352 ntTSL 2 BASIC25.95■■□□□ 1.74
COL23A1Q86Y22 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
COL23A1Q86Y22 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
COL23A1Q86Y22 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
COL23A1Q86Y22 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
COL23A1Q86Y22 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
COL23A1Q86Y22 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
COL23A1Q86Y22 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
COL23A1Q86Y22 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC25.94■■□□□ 1.74
COL23A1Q86Y22 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
COL23A1Q86Y22 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
COL23A1Q86Y22 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
COL23A1Q86Y22 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC25.94■■□□□ 1.74
COL23A1Q86Y22 HES2-206ENST00000489730 730 ntTSL 2 BASIC25.94■■□□□ 1.74
COL23A1Q86Y22 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
COL23A1Q86Y22 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
COL23A1Q86Y22 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
COL23A1Q86Y22 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC25.94■■□□□ 1.74
COL23A1Q86Y22 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
COL23A1Q86Y22 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.94■■□□□ 1.74
COL23A1Q86Y22 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
COL23A1Q86Y22 CYP2D8P-201ENST00000433633 1490 ntBASIC25.93■■□□□ 1.74
COL23A1Q86Y22 MIR1238-201ENST00000408483 83 ntBASIC25.93■■□□□ 1.74
COL23A1Q86Y22 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
COL23A1Q86Y22 AC104076.2-201ENST00000448912 469 ntBASIC25.93■■□□□ 1.74
COL23A1Q86Y22 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC25.93■■□□□ 1.74
COL23A1Q86Y22 NUDT16P1-203ENST00000513809 620 ntBASIC25.93■■□□□ 1.74
COL23A1Q86Y22 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC25.93■■□□□ 1.74
COL23A1Q86Y22 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC25.93■■□□□ 1.74
COL23A1Q86Y22 AC073195.1-201ENST00000607241 877 ntBASIC25.93■■□□□ 1.74
COL23A1Q86Y22 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC25.93■■□□□ 1.74
COL23A1Q86Y22 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
COL23A1Q86Y22 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
COL23A1Q86Y22 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
COL23A1Q86Y22 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
COL23A1Q86Y22 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
COL23A1Q86Y22 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
COL23A1Q86Y22 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
COL23A1Q86Y22 AL353807.1-201ENST00000427475 662 ntBASIC25.92■■□□□ 1.74
COL23A1Q86Y22 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC25.92■■□□□ 1.74
COL23A1Q86Y22 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC25.92■■□□□ 1.74
COL23A1Q86Y22 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
COL23A1Q86Y22 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
COL23A1Q86Y22 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
COL23A1Q86Y22 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC25.92■■□□□ 1.74
COL23A1Q86Y22 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.92■■□□□ 1.74
COL23A1Q86Y22 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC25.91■■□□□ 1.74
COL23A1Q86Y22 UNC93B2-201ENST00000285383 730 ntBASIC25.91■■□□□ 1.74
COL23A1Q86Y22 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL23A1Q86Y22 DUX4L26-201ENST00000489078 1255 ntBASIC25.91■■□□□ 1.74
COL23A1Q86Y22 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC25.91■■□□□ 1.74
COL23A1Q86Y22 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
COL23A1Q86Y22 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC25.91■■□□□ 1.74
COL23A1Q86Y22 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL23A1Q86Y22 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL23A1Q86Y22 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
COL23A1Q86Y22 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
COL23A1Q86Y22 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
COL23A1Q86Y22 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL23A1Q86Y22 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
COL23A1Q86Y22 AL137013.1-201ENST00000432946 1228 ntBASIC25.9■■□□□ 1.74
COL23A1Q86Y22 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
COL23A1Q86Y22 F2R-202ENST00000505600 442 ntTSL 2 BASIC25.9■■□□□ 1.74
COL23A1Q86Y22 AL121829.2-201ENST00000620908 328 ntBASIC25.9■■□□□ 1.74
COL23A1Q86Y22 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC25.9■■□□□ 1.74
COL23A1Q86Y22 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
COL23A1Q86Y22 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL23A1Q86Y22 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 546.6 ms