Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
TRIM50Q86XT4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC22.88■■□□□ 1.25
TRIM50Q86XT4 HES2-205ENST00000487437 968 ntTSL 3 BASIC22.88■■□□□ 1.25
TRIM50Q86XT4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC22.88■■□□□ 1.25
TRIM50Q86XT4 UNC93B4-201ENST00000505679 747 ntBASIC22.88■■□□□ 1.25
TRIM50Q86XT4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TRIM50Q86XT4 AC142381.4-202ENST00000563973 229 ntBASIC22.88■■□□□ 1.25
TRIM50Q86XT4 SOX15-203ENST00000570788 1093 ntBASIC22.88■■□□□ 1.25
TRIM50Q86XT4 AC233263.1-201ENST00000578059 224 ntBASIC22.88■■□□□ 1.25
TRIM50Q86XT4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TRIM50Q86XT4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TRIM50Q86XT4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
TRIM50Q86XT4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TRIM50Q86XT4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC22.88■■□□□ 1.25
TRIM50Q86XT4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM50Q86XT4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM50Q86XT4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
TRIM50Q86XT4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
TRIM50Q86XT4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM50Q86XT4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM50Q86XT4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.87■■□□□ 1.25
TRIM50Q86XT4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM50Q86XT4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM50Q86XT4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM50Q86XT4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM50Q86XT4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM50Q86XT4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM50Q86XT4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM50Q86XT4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
TRIM50Q86XT4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC22.87■■□□□ 1.25
TRIM50Q86XT4 C2orf69P4-201ENST00000565394 541 ntBASIC22.87■■□□□ 1.25
TRIM50Q86XT4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC22.87■■□□□ 1.25
TRIM50Q86XT4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
TRIM50Q86XT4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM50Q86XT4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM50Q86XT4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.86■■□□□ 1.25
TRIM50Q86XT4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.86■■□□□ 1.25
TRIM50Q86XT4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
TRIM50Q86XT4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC22.86■■□□□ 1.25
TRIM50Q86XT4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM50Q86XT4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM50Q86XT4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM50Q86XT4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM50Q86XT4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM50Q86XT4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
TRIM50Q86XT4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM50Q86XT4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM50Q86XT4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM50Q86XT4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM50Q86XT4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM50Q86XT4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
TRIM50Q86XT4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
TRIM50Q86XT4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM50Q86XT4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM50Q86XT4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM50Q86XT4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM50Q86XT4 AL024507.2-201ENST00000606070 2574 ntBASIC22.85■■□□□ 1.25
TRIM50Q86XT4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM50Q86XT4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM50Q86XT4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.85■■□□□ 1.25
TRIM50Q86XT4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC22.85■■□□□ 1.25
TRIM50Q86XT4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.85■■□□□ 1.25
TRIM50Q86XT4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
TRIM50Q86XT4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM50Q86XT4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM50Q86XT4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.84■■□□□ 1.25
TRIM50Q86XT4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.84■■□□□ 1.25
TRIM50Q86XT4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
TRIM50Q86XT4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
TRIM50Q86XT4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM50Q86XT4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
TRIM50Q86XT4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM50Q86XT4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.84■■□□□ 1.25
TRIM50Q86XT4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.84■■□□□ 1.25
TRIM50Q86XT4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC22.84■■□□□ 1.25
TRIM50Q86XT4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC22.84■■□□□ 1.25
TRIM50Q86XT4 OR2A1-AS1-207ENST00000486094 819 ntBASIC22.84■■□□□ 1.25
TRIM50Q86XT4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM50Q86XT4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC22.84■■□□□ 1.25
TRIM50Q86XT4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM50Q86XT4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM50Q86XT4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.84■■□□□ 1.25
TRIM50Q86XT4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.84■■□□□ 1.25
TRIM50Q86XT4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.83■■□□□ 1.25
TRIM50Q86XT4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
TRIM50Q86XT4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
TRIM50Q86XT4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.83■■□□□ 1.25
TRIM50Q86XT4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.83■■□□□ 1.25
TRIM50Q86XT4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.83■■□□□ 1.25
TRIM50Q86XT4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC22.83■■□□□ 1.25
TRIM50Q86XT4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
TRIM50Q86XT4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC22.83■■□□□ 1.25
TRIM50Q86XT4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC22.83■■□□□ 1.25
TRIM50Q86XT4 AL356652.1-201ENST00000615962 565 ntBASIC22.83■■□□□ 1.25
TRIM50Q86XT4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
TRIM50Q86XT4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
TRIM50Q86XT4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.24
TRIM50Q86XT4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM50Q86XT4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM50Q86XT4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms