Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3HC1Q86WB0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3HC1Q86WB0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3HC1Q86WB0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.35■□□□□ 0.85
ZC3HC1Q86WB0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
ZC3HC1Q86WB0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3HC1Q86WB0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.35■□□□□ 0.85
ZC3HC1Q86WB0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.35■□□□□ 0.85
ZC3HC1Q86WB0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ZC3HC1Q86WB0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
ZC3HC1Q86WB0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3HC1Q86WB0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
ZC3HC1Q86WB0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3HC1Q86WB0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.34■□□□□ 0.85
ZC3HC1Q86WB0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3HC1Q86WB0 AC019069.1-201ENST00000610008 1333 ntBASIC20.34■□□□□ 0.85
ZC3HC1Q86WB0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3HC1Q86WB0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3HC1Q86WB0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3HC1Q86WB0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3HC1Q86WB0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3HC1Q86WB0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3HC1Q86WB0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.34■□□□□ 0.85
ZC3HC1Q86WB0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3HC1Q86WB0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.34■□□□□ 0.85
ZC3HC1Q86WB0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.34■□□□□ 0.85
ZC3HC1Q86WB0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.34■□□□□ 0.85
ZC3HC1Q86WB0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3HC1Q86WB0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ZC3HC1Q86WB0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ZC3HC1Q86WB0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZC3HC1Q86WB0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZC3HC1Q86WB0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
ZC3HC1Q86WB0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.33■□□□□ 0.85
ZC3HC1Q86WB0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZC3HC1Q86WB0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.33■□□□□ 0.85
ZC3HC1Q86WB0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.33■□□□□ 0.85
ZC3HC1Q86WB0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZC3HC1Q86WB0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.33■□□□□ 0.85
ZC3HC1Q86WB0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ZC3HC1Q86WB0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.33■□□□□ 0.84
ZC3HC1Q86WB0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
ZC3HC1Q86WB0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZC3HC1Q86WB0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZC3HC1Q86WB0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZC3HC1Q86WB0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZC3HC1Q86WB0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3HC1Q86WB0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3HC1Q86WB0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3HC1Q86WB0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.32■□□□□ 0.84
ZC3HC1Q86WB0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3HC1Q86WB0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3HC1Q86WB0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ZC3HC1Q86WB0 AFG3L1P-217ENST00000557444 2447 ntBASIC20.32■□□□□ 0.84
ZC3HC1Q86WB0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3HC1Q86WB0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3HC1Q86WB0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3HC1Q86WB0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3HC1Q86WB0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3HC1Q86WB0 KRT19P1-201ENST00000405746 1186 ntBASIC20.32■□□□□ 0.84
ZC3HC1Q86WB0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.32■□□□□ 0.84
ZC3HC1Q86WB0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.32■□□□□ 0.84
ZC3HC1Q86WB0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.32■□□□□ 0.84
ZC3HC1Q86WB0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.32■□□□□ 0.84
ZC3HC1Q86WB0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3HC1Q86WB0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3HC1Q86WB0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ZC3HC1Q86WB0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3HC1Q86WB0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3HC1Q86WB0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3HC1Q86WB0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3HC1Q86WB0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.31■□□□□ 0.84
ZC3HC1Q86WB0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.31■□□□□ 0.84
ZC3HC1Q86WB0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.31■□□□□ 0.84
ZC3HC1Q86WB0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3HC1Q86WB0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.31■□□□□ 0.84
ZC3HC1Q86WB0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3HC1Q86WB0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3HC1Q86WB0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3HC1Q86WB0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3HC1Q86WB0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.31■□□□□ 0.84
ZC3HC1Q86WB0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.31■□□□□ 0.84
ZC3HC1Q86WB0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.31■□□□□ 0.84
ZC3HC1Q86WB0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.31■□□□□ 0.84
ZC3HC1Q86WB0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.31■□□□□ 0.84
ZC3HC1Q86WB0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ZC3HC1Q86WB0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3HC1Q86WB0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3HC1Q86WB0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3HC1Q86WB0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.31■□□□□ 0.84
ZC3HC1Q86WB0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.31■□□□□ 0.84
ZC3HC1Q86WB0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ZC3HC1Q86WB0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
ZC3HC1Q86WB0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3HC1Q86WB0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.3■□□□□ 0.84
ZC3HC1Q86WB0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.3■□□□□ 0.84
ZC3HC1Q86WB0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3HC1Q86WB0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3HC1Q86WB0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3HC1Q86WB0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms