Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDHR3Q6ZTQ4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDHR3Q6ZTQ4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDHR3Q6ZTQ4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.54■□□□□ 0.88
CDHR3Q6ZTQ4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.54■□□□□ 0.88
CDHR3Q6ZTQ4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.54■□□□□ 0.88
CDHR3Q6ZTQ4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.54■□□□□ 0.88
CDHR3Q6ZTQ4 AL137784.2-201ENST00000607332 1000 ntBASIC20.54■□□□□ 0.88
CDHR3Q6ZTQ4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.54■□□□□ 0.88
CDHR3Q6ZTQ4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.54■□□□□ 0.88
CDHR3Q6ZTQ4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDHR3Q6ZTQ4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDHR3Q6ZTQ4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDHR3Q6ZTQ4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDHR3Q6ZTQ4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.54■□□□□ 0.88
CDHR3Q6ZTQ4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CDHR3Q6ZTQ4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDHR3Q6ZTQ4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.53■□□□□ 0.88
CDHR3Q6ZTQ4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDHR3Q6ZTQ4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDHR3Q6ZTQ4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDHR3Q6ZTQ4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDHR3Q6ZTQ4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.53■□□□□ 0.88
CDHR3Q6ZTQ4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDHR3Q6ZTQ4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDHR3Q6ZTQ4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDHR3Q6ZTQ4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDHR3Q6ZTQ4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.53■□□□□ 0.88
CDHR3Q6ZTQ4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDHR3Q6ZTQ4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.53■□□□□ 0.88
CDHR3Q6ZTQ4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDHR3Q6ZTQ4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDHR3Q6ZTQ4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CDHR3Q6ZTQ4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDHR3Q6ZTQ4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CDHR3Q6ZTQ4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDHR3Q6ZTQ4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDHR3Q6ZTQ4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDHR3Q6ZTQ4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDHR3Q6ZTQ4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDHR3Q6ZTQ4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDHR3Q6ZTQ4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.52■□□□□ 0.88
CDHR3Q6ZTQ4 AC011484.1-201ENST00000377652 1995 ntBASIC20.52■□□□□ 0.88
CDHR3Q6ZTQ4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDHR3Q6ZTQ4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
CDHR3Q6ZTQ4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDHR3Q6ZTQ4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDHR3Q6ZTQ4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.52■□□□□ 0.88
CDHR3Q6ZTQ4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.52■□□□□ 0.88
CDHR3Q6ZTQ4 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.52■□□□□ 0.88
CDHR3Q6ZTQ4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.52■□□□□ 0.88
CDHR3Q6ZTQ4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CDHR3Q6ZTQ4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
CDHR3Q6ZTQ4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.52■□□□□ 0.87
CDHR3Q6ZTQ4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDHR3Q6ZTQ4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CDHR3Q6ZTQ4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.51■□□□□ 0.87
CDHR3Q6ZTQ4 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.51■□□□□ 0.87
CDHR3Q6ZTQ4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDHR3Q6ZTQ4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.51■□□□□ 0.87
CDHR3Q6ZTQ4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.51■□□□□ 0.87
CDHR3Q6ZTQ4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDHR3Q6ZTQ4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CDHR3Q6ZTQ4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDHR3Q6ZTQ4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDHR3Q6ZTQ4 AC061975.6-201ENST00000579045 1553 ntBASIC20.51■□□□□ 0.87
CDHR3Q6ZTQ4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CDHR3Q6ZTQ4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDHR3Q6ZTQ4 KRT87P-202ENST00000534226 1464 ntBASIC20.5■□□□□ 0.87
CDHR3Q6ZTQ4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDHR3Q6ZTQ4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.5■□□□□ 0.87
CDHR3Q6ZTQ4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.5■□□□□ 0.87
CDHR3Q6ZTQ4 AC004911.1-201ENST00000416316 871 ntBASIC20.5■□□□□ 0.87
CDHR3Q6ZTQ4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.5■□□□□ 0.87
CDHR3Q6ZTQ4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDHR3Q6ZTQ4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
CDHR3Q6ZTQ4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDHR3Q6ZTQ4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDHR3Q6ZTQ4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDHR3Q6ZTQ4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDHR3Q6ZTQ4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDHR3Q6ZTQ4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDHR3Q6ZTQ4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDHR3Q6ZTQ4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDHR3Q6ZTQ4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDHR3Q6ZTQ4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDHR3Q6ZTQ4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.49■□□□□ 0.87
CDHR3Q6ZTQ4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDHR3Q6ZTQ4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.49■□□□□ 0.87
CDHR3Q6ZTQ4 KRT19P1-201ENST00000405746 1186 ntBASIC20.49■□□□□ 0.87
CDHR3Q6ZTQ4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.49■□□□□ 0.87
CDHR3Q6ZTQ4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.49■□□□□ 0.87
CDHR3Q6ZTQ4 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.49■□□□□ 0.87
CDHR3Q6ZTQ4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDHR3Q6ZTQ4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDHR3Q6ZTQ4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDHR3Q6ZTQ4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.49■□□□□ 0.87
CDHR3Q6ZTQ4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDHR3Q6ZTQ4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.49■□□□□ 0.87
CDHR3Q6ZTQ4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms