Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNI2Q6ZMN8 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNI2Q6ZMN8 AC010141.3-201ENST00000456659 717 ntBASIC21.63■■□□□ 1.05
CCNI2Q6ZMN8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.63■■□□□ 1.05
CCNI2Q6ZMN8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CCNI2Q6ZMN8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCNI2Q6ZMN8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CCNI2Q6ZMN8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCNI2Q6ZMN8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNI2Q6ZMN8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNI2Q6ZMN8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNI2Q6ZMN8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.63■■□□□ 1.05
CCNI2Q6ZMN8 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CCNI2Q6ZMN8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.63■■□□□ 1.05
CCNI2Q6ZMN8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.63■■□□□ 1.05
CCNI2Q6ZMN8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.63■■□□□ 1.05
CCNI2Q6ZMN8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCNI2Q6ZMN8 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNI2Q6ZMN8 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CCNI2Q6ZMN8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCNI2Q6ZMN8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CCNI2Q6ZMN8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
CCNI2Q6ZMN8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.62■■□□□ 1.05
CCNI2Q6ZMN8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.62■■□□□ 1.05
CCNI2Q6ZMN8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CCNI2Q6ZMN8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.62■■□□□ 1.05
CCNI2Q6ZMN8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCNI2Q6ZMN8 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CCNI2Q6ZMN8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCNI2Q6ZMN8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCNI2Q6ZMN8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCNI2Q6ZMN8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNI2Q6ZMN8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.61■■□□□ 1.05
CCNI2Q6ZMN8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNI2Q6ZMN8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
CCNI2Q6ZMN8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CCNI2Q6ZMN8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNI2Q6ZMN8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CCNI2Q6ZMN8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCNI2Q6ZMN8 AC018445.3-201ENST00000624177 1945 ntBASIC21.61■■□□□ 1.05
CCNI2Q6ZMN8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNI2Q6ZMN8 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNI2Q6ZMN8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CCNI2Q6ZMN8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCNI2Q6ZMN8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNI2Q6ZMN8 AC006015.1-201ENST00000429970 570 ntBASIC21.61■■□□□ 1.05
CCNI2Q6ZMN8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCNI2Q6ZMN8 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNI2Q6ZMN8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.61■■□□□ 1.05
CCNI2Q6ZMN8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.61■■□□□ 1.05
CCNI2Q6ZMN8 AC087239.1-201ENST00000622671 572 ntBASIC21.61■■□□□ 1.05
CCNI2Q6ZMN8 TMEM191A-211ENST00000637163 1067 ntBASIC21.61■■□□□ 1.05
CCNI2Q6ZMN8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.61■■□□□ 1.05
CCNI2Q6ZMN8 BX323043.1-201ENST00000641006 1765 ntBASIC21.61■■□□□ 1.05
CCNI2Q6ZMN8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.61■■□□□ 1.05
CCNI2Q6ZMN8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNI2Q6ZMN8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNI2Q6ZMN8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CCNI2Q6ZMN8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CCNI2Q6ZMN8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCNI2Q6ZMN8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.6■■□□□ 1.05
CCNI2Q6ZMN8 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.6■■□□□ 1.05
CCNI2Q6ZMN8 CDCA4P2-201ENST00000441182 718 ntBASIC21.6■■□□□ 1.05
CCNI2Q6ZMN8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.6■■□□□ 1.05
CCNI2Q6ZMN8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.6■■□□□ 1.05
CCNI2Q6ZMN8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCNI2Q6ZMN8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.6■■□□□ 1.05
CCNI2Q6ZMN8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNI2Q6ZMN8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNI2Q6ZMN8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.59■■□□□ 1.05
CCNI2Q6ZMN8 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNI2Q6ZMN8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNI2Q6ZMN8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.59■■□□□ 1.05
CCNI2Q6ZMN8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNI2Q6ZMN8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNI2Q6ZMN8 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.59■■□□□ 1.05
CCNI2Q6ZMN8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNI2Q6ZMN8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.59■■□□□ 1.05
CCNI2Q6ZMN8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNI2Q6ZMN8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNI2Q6ZMN8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNI2Q6ZMN8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.59■■□□□ 1.05
CCNI2Q6ZMN8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNI2Q6ZMN8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.59■■□□□ 1.05
CCNI2Q6ZMN8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CCNI2Q6ZMN8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCNI2Q6ZMN8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.58■■□□□ 1.05
CCNI2Q6ZMN8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.58■■□□□ 1.05
CCNI2Q6ZMN8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
CCNI2Q6ZMN8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.58■■□□□ 1.05
CCNI2Q6ZMN8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.58■■□□□ 1.05
CCNI2Q6ZMN8 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCNI2Q6ZMN8 AC104771.1-201ENST00000603335 964 ntBASIC21.58■■□□□ 1.05
CCNI2Q6ZMN8 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.58■■□□□ 1.05
CCNI2Q6ZMN8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCNI2Q6ZMN8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.58■■□□□ 1.05
CCNI2Q6ZMN8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCNI2Q6ZMN8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.58■■□□□ 1.05
CCNI2Q6ZMN8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
CCNI2Q6ZMN8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms