Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PACS1Q6VY07 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.66■□□□□ 0.9
PACS1Q6VY07 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PACS1Q6VY07 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PACS1Q6VY07 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PACS1Q6VY07 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PACS1Q6VY07 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PACS1Q6VY07 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PACS1Q6VY07 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.65■□□□□ 0.9
PACS1Q6VY07 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PACS1Q6VY07 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PACS1Q6VY07 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PACS1Q6VY07 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.65■□□□□ 0.9
PACS1Q6VY07 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PACS1Q6VY07 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PACS1Q6VY07 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.65■□□□□ 0.9
PACS1Q6VY07 SLC7A5P2-201ENST00000553010 536 ntBASIC20.65■□□□□ 0.9
PACS1Q6VY07 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.65■□□□□ 0.9
PACS1Q6VY07 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PACS1Q6VY07 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.65■□□□□ 0.9
PACS1Q6VY07 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PACS1Q6VY07 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PACS1Q6VY07 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
PACS1Q6VY07 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PACS1Q6VY07 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
PACS1Q6VY07 AL512408.1-201ENST00000569378 2000 ntBASIC20.65■□□□□ 0.9
PACS1Q6VY07 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.65■□□□□ 0.9
PACS1Q6VY07 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PACS1Q6VY07 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
PACS1Q6VY07 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PACS1Q6VY07 AL162377.1-201ENST00000618844 1793 ntBASIC20.64■□□□□ 0.9
PACS1Q6VY07 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PACS1Q6VY07 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.64■□□□□ 0.89
PACS1Q6VY07 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PACS1Q6VY07 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.64■□□□□ 0.89
PACS1Q6VY07 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PACS1Q6VY07 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.64■□□□□ 0.89
PACS1Q6VY07 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PACS1Q6VY07 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.64■□□□□ 0.89
PACS1Q6VY07 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PACS1Q6VY07 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PACS1Q6VY07 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PACS1Q6VY07 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PACS1Q6VY07 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PACS1Q6VY07 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.64■□□□□ 0.89
PACS1Q6VY07 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PACS1Q6VY07 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PACS1Q6VY07 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PACS1Q6VY07 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PACS1Q6VY07 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PACS1Q6VY07 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
PACS1Q6VY07 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.63■□□□□ 0.89
PACS1Q6VY07 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.63■□□□□ 0.89
PACS1Q6VY07 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PACS1Q6VY07 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PACS1Q6VY07 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PACS1Q6VY07 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.63■□□□□ 0.89
PACS1Q6VY07 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
PACS1Q6VY07 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.63■□□□□ 0.89
PACS1Q6VY07 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.63■□□□□ 0.89
PACS1Q6VY07 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PACS1Q6VY07 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PACS1Q6VY07 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PACS1Q6VY07 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PACS1Q6VY07 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PACS1Q6VY07 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PACS1Q6VY07 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PACS1Q6VY07 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.62■□□□□ 0.89
PACS1Q6VY07 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PACS1Q6VY07 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PACS1Q6VY07 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PACS1Q6VY07 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PACS1Q6VY07 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.62■□□□□ 0.89
PACS1Q6VY07 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PACS1Q6VY07 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.62■□□□□ 0.89
PACS1Q6VY07 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PACS1Q6VY07 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PACS1Q6VY07 UBE2DNL-204ENST00000602536 740 ntBASIC20.62■□□□□ 0.89
PACS1Q6VY07 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PACS1Q6VY07 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PACS1Q6VY07 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PACS1Q6VY07 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PACS1Q6VY07 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
PACS1Q6VY07 PCDHAC2-203ENST00000615316 3011 ntBASIC20.62■□□□□ 0.89
PACS1Q6VY07 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PACS1Q6VY07 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PACS1Q6VY07 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
PACS1Q6VY07 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.61■□□□□ 0.89
PACS1Q6VY07 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PACS1Q6VY07 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PACS1Q6VY07 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PACS1Q6VY07 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.61■□□□□ 0.89
PACS1Q6VY07 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PACS1Q6VY07 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PACS1Q6VY07 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PACS1Q6VY07 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.61■□□□□ 0.89
PACS1Q6VY07 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PACS1Q6VY07 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.61■□□□□ 0.89
PACS1Q6VY07 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.61■□□□□ 0.89
PACS1Q6VY07 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms