Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VSTM1Q6UX27 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.8■■□□□ 1.08
VSTM1Q6UX27 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VSTM1Q6UX27 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
VSTM1Q6UX27 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VSTM1Q6UX27 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.8■■□□□ 1.08
VSTM1Q6UX27 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VSTM1Q6UX27 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
VSTM1Q6UX27 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VSTM1Q6UX27 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VSTM1Q6UX27 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VSTM1Q6UX27 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.8■■□□□ 1.08
VSTM1Q6UX27 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VSTM1Q6UX27 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VSTM1Q6UX27 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
VSTM1Q6UX27 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
VSTM1Q6UX27 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VSTM1Q6UX27 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VSTM1Q6UX27 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
VSTM1Q6UX27 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.79■■□□□ 1.08
VSTM1Q6UX27 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VSTM1Q6UX27 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
VSTM1Q6UX27 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VSTM1Q6UX27 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.79■■□□□ 1.08
VSTM1Q6UX27 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
VSTM1Q6UX27 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.79■■□□□ 1.08
VSTM1Q6UX27 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.79■■□□□ 1.08
VSTM1Q6UX27 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.79■■□□□ 1.08
VSTM1Q6UX27 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
VSTM1Q6UX27 CYP2T3P-201ENST00000601990 817 ntBASIC21.79■■□□□ 1.08
VSTM1Q6UX27 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
VSTM1Q6UX27 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VSTM1Q6UX27 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
VSTM1Q6UX27 AL121603.2-201ENST00000557373 2117 ntBASIC21.79■■□□□ 1.08
VSTM1Q6UX27 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VSTM1Q6UX27 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
VSTM1Q6UX27 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
VSTM1Q6UX27 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VSTM1Q6UX27 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
VSTM1Q6UX27 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VSTM1Q6UX27 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VSTM1Q6UX27 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.78■■□□□ 1.08
VSTM1Q6UX27 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
VSTM1Q6UX27 CD99P1-205ENST00000527459 561 ntBASIC21.78■■□□□ 1.08
VSTM1Q6UX27 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.78■■□□□ 1.08
VSTM1Q6UX27 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.78■■□□□ 1.08
VSTM1Q6UX27 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
VSTM1Q6UX27 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.78■■□□□ 1.08
VSTM1Q6UX27 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
VSTM1Q6UX27 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VSTM1Q6UX27 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
VSTM1Q6UX27 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.78■■□□□ 1.08
VSTM1Q6UX27 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VSTM1Q6UX27 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
VSTM1Q6UX27 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
VSTM1Q6UX27 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VSTM1Q6UX27 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
VSTM1Q6UX27 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.77■■□□□ 1.08
VSTM1Q6UX27 LSM12P1-201ENST00000411836 588 ntBASIC21.77■■□□□ 1.08
VSTM1Q6UX27 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
VSTM1Q6UX27 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
VSTM1Q6UX27 MYC-209ENST00000641252 345 ntBASIC21.77■■□□□ 1.08
VSTM1Q6UX27 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.77■■□□□ 1.08
VSTM1Q6UX27 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.77■■□□□ 1.08
VSTM1Q6UX27 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
VSTM1Q6UX27 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VSTM1Q6UX27 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VSTM1Q6UX27 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
VSTM1Q6UX27 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VSTM1Q6UX27 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.76■■□□□ 1.07
VSTM1Q6UX27 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VSTM1Q6UX27 AL355472.2-201ENST00000422958 438 ntBASIC21.76■■□□□ 1.07
VSTM1Q6UX27 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.76■■□□□ 1.07
VSTM1Q6UX27 AC097658.1-201ENST00000475555 843 ntBASIC21.76■■□□□ 1.07
VSTM1Q6UX27 AC091874.3-201ENST00000512672 1195 ntBASIC21.76■■□□□ 1.07
VSTM1Q6UX27 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
VSTM1Q6UX27 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.76■■□□□ 1.07
VSTM1Q6UX27 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.76■■□□□ 1.07
VSTM1Q6UX27 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
VSTM1Q6UX27 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.76■■□□□ 1.07
VSTM1Q6UX27 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
VSTM1Q6UX27 AC092667.1-201ENST00000434301 2586 ntBASIC21.76■■□□□ 1.07
VSTM1Q6UX27 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
VSTM1Q6UX27 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VSTM1Q6UX27 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
VSTM1Q6UX27 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VSTM1Q6UX27 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
VSTM1Q6UX27 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VSTM1Q6UX27 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.75■■□□□ 1.07
VSTM1Q6UX27 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VSTM1Q6UX27 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
VSTM1Q6UX27 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.75■■□□□ 1.07
VSTM1Q6UX27 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
VSTM1Q6UX27 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
VSTM1Q6UX27 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.75■■□□□ 1.07
VSTM1Q6UX27 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.75■■□□□ 1.07
VSTM1Q6UX27 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.75■■□□□ 1.07
VSTM1Q6UX27 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
VSTM1Q6UX27 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.75■■□□□ 1.07
VSTM1Q6UX27 AL589743.5-201ENST00000616611 1050 ntBASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms