Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM53Q6P2H8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM53Q6P2H8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
TMEM53Q6P2H8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
TMEM53Q6P2H8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM53Q6P2H8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM53Q6P2H8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM53Q6P2H8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM53Q6P2H8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM53Q6P2H8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM53Q6P2H8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.61■□□□□ 0.57
TMEM53Q6P2H8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TMEM53Q6P2H8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM53Q6P2H8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM53Q6P2H8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
TMEM53Q6P2H8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM53Q6P2H8 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM53Q6P2H8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM53Q6P2H8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM53Q6P2H8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM53Q6P2H8 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM53Q6P2H8 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.61■□□□□ 0.57
TMEM53Q6P2H8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.61■□□□□ 0.57
TMEM53Q6P2H8 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.61■□□□□ 0.57
TMEM53Q6P2H8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM53Q6P2H8 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM53Q6P2H8 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TMEM53Q6P2H8 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM53Q6P2H8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM53Q6P2H8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TMEM53Q6P2H8 AC055733.4-201ENST00000638462 1354 ntBASIC18.6■□□□□ 0.57
TMEM53Q6P2H8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TMEM53Q6P2H8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.6■□□□□ 0.57
TMEM53Q6P2H8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TMEM53Q6P2H8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM53Q6P2H8 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
TMEM53Q6P2H8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.6■□□□□ 0.57
TMEM53Q6P2H8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TMEM53Q6P2H8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.6■□□□□ 0.57
TMEM53Q6P2H8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TMEM53Q6P2H8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TMEM53Q6P2H8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM53Q6P2H8 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TMEM53Q6P2H8 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.6■□□□□ 0.57
TMEM53Q6P2H8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM53Q6P2H8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMEM53Q6P2H8 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMEM53Q6P2H8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMEM53Q6P2H8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.58■□□□□ 0.57
TMEM53Q6P2H8 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.58■□□□□ 0.57
TMEM53Q6P2H8 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.58■□□□□ 0.56
TMEM53Q6P2H8 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
TMEM53Q6P2H8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM53Q6P2H8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.58■□□□□ 0.56
TMEM53Q6P2H8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
TMEM53Q6P2H8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM53Q6P2H8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.58■□□□□ 0.56
TMEM53Q6P2H8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
TMEM53Q6P2H8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM53Q6P2H8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.58■□□□□ 0.56
TMEM53Q6P2H8 AC079140.4-201ENST00000507448 529 ntBASIC18.58■□□□□ 0.56
TMEM53Q6P2H8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.58■□□□□ 0.56
TMEM53Q6P2H8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.58■□□□□ 0.56
TMEM53Q6P2H8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.58■□□□□ 0.56
TMEM53Q6P2H8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.58■□□□□ 0.56
TMEM53Q6P2H8 NOC2LP1-202ENST00000452600 2235 ntBASIC18.58■□□□□ 0.56
TMEM53Q6P2H8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM53Q6P2H8 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TMEM53Q6P2H8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM53Q6P2H8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms