Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.42
HIST2H2BCQ6DN03 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
HIST2H2BCQ6DN03 AC142381.3-201ENST00000568208 1670 ntBASIC17.71■□□□□ 0.42
HIST2H2BCQ6DN03 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HIST2H2BCQ6DN03 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
HIST2H2BCQ6DN03 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.7■□□□□ 0.42
HIST2H2BCQ6DN03 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.7■□□□□ 0.42
HIST2H2BCQ6DN03 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HIST2H2BCQ6DN03 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.7■□□□□ 0.42
HIST2H2BCQ6DN03 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.7■□□□□ 0.42
HIST2H2BCQ6DN03 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.7■□□□□ 0.42
HIST2H2BCQ6DN03 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.7■□□□□ 0.42
HIST2H2BCQ6DN03 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.7■□□□□ 0.42
HIST2H2BCQ6DN03 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.7■□□□□ 0.42
HIST2H2BCQ6DN03 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HIST2H2BCQ6DN03 CLEC4GP1-201ENST00000596555 870 ntBASIC17.7■□□□□ 0.42
HIST2H2BCQ6DN03 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.7■□□□□ 0.42
HIST2H2BCQ6DN03 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HIST2H2BCQ6DN03 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.7■□□□□ 0.42
HIST2H2BCQ6DN03 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HIST2H2BCQ6DN03 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HIST2H2BCQ6DN03 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HIST2H2BCQ6DN03 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST2H2BCQ6DN03 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.69■□□□□ 0.42
HIST2H2BCQ6DN03 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.69■□□□□ 0.42
HIST2H2BCQ6DN03 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST2H2BCQ6DN03 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST2H2BCQ6DN03 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST2H2BCQ6DN03 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
HIST2H2BCQ6DN03 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST2H2BCQ6DN03 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HIST2H2BCQ6DN03 AC063952.2-201ENST00000498792 1227 ntBASIC17.69■□□□□ 0.42
HIST2H2BCQ6DN03 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HIST2H2BCQ6DN03 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.69■□□□□ 0.42
HIST2H2BCQ6DN03 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.69■□□□□ 0.42
HIST2H2BCQ6DN03 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.69■□□□□ 0.42
HIST2H2BCQ6DN03 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.69■□□□□ 0.42
HIST2H2BCQ6DN03 AC012313.10-201ENST00000623509 926 ntBASIC17.69■□□□□ 0.42
HIST2H2BCQ6DN03 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.69■□□□□ 0.42
HIST2H2BCQ6DN03 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.69■□□□□ 0.42
HIST2H2BCQ6DN03 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HIST2H2BCQ6DN03 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
HIST2H2BCQ6DN03 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST2H2BCQ6DN03 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST2H2BCQ6DN03 NBPF21P-201ENST00000425093 1451 ntBASIC17.69■□□□□ 0.42
HIST2H2BCQ6DN03 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC17.69■□□□□ 0.42
HIST2H2BCQ6DN03 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HIST2H2BCQ6DN03 AC124283.5-201ENST00000624661 1809 ntBASIC17.68■□□□□ 0.42
HIST2H2BCQ6DN03 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST2H2BCQ6DN03 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.68■□□□□ 0.42
HIST2H2BCQ6DN03 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.68■□□□□ 0.42
HIST2H2BCQ6DN03 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST2H2BCQ6DN03 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.68■□□□□ 0.42
HIST2H2BCQ6DN03 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.68■□□□□ 0.42
HIST2H2BCQ6DN03 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
HIST2H2BCQ6DN03 AP000550.4-202ENST00000639755 178 ntBASIC17.68■□□□□ 0.42
HIST2H2BCQ6DN03 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST2H2BCQ6DN03 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.68■□□□□ 0.42
HIST2H2BCQ6DN03 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST2H2BCQ6DN03 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIST2H2BCQ6DN03 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST2H2BCQ6DN03 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST2H2BCQ6DN03 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HIST2H2BCQ6DN03 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIST2H2BCQ6DN03 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST2H2BCQ6DN03 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
HIST2H2BCQ6DN03 AC246785.2-201ENST00000432512 513 ntBASIC17.67■□□□□ 0.42
HIST2H2BCQ6DN03 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.67■□□□□ 0.42
HIST2H2BCQ6DN03 AP002982.1-201ENST00000492365 877 ntBASIC17.67■□□□□ 0.42
HIST2H2BCQ6DN03 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.67■□□□□ 0.42
HIST2H2BCQ6DN03 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIST2H2BCQ6DN03 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.67■□□□□ 0.42
HIST2H2BCQ6DN03 CR392000.1-201ENST00000624770 1228 ntBASIC17.67■□□□□ 0.42
HIST2H2BCQ6DN03 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.67■□□□□ 0.42
HIST2H2BCQ6DN03 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIST2H2BCQ6DN03 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIST2H2BCQ6DN03 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.67■□□□□ 0.42
HIST2H2BCQ6DN03 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST2H2BCQ6DN03 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST2H2BCQ6DN03 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.66■□□□□ 0.42
HIST2H2BCQ6DN03 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST2H2BCQ6DN03 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST2H2BCQ6DN03 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST2H2BCQ6DN03 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HIST2H2BCQ6DN03 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST2H2BCQ6DN03 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST2H2BCQ6DN03 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HIST2H2BCQ6DN03 AC117947.1-201ENST00000427448 529 ntBASIC17.66■□□□□ 0.42
HIST2H2BCQ6DN03 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.66■□□□□ 0.42
HIST2H2BCQ6DN03 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST2H2BCQ6DN03 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.66■□□□□ 0.42
HIST2H2BCQ6DN03 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.66■□□□□ 0.42
HIST2H2BCQ6DN03 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.66■□□□□ 0.42
HIST2H2BCQ6DN03 MYC-208ENST00000641036 567 ntBASIC17.66■□□□□ 0.42
HIST2H2BCQ6DN03 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HIST2H2BCQ6DN03 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.66■□□□□ 0.42
HIST2H2BCQ6DN03 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
HIST2H2BCQ6DN03 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
HIST2H2BCQ6DN03 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HIST2H2BCQ6DN03 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms