Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF43Q68DV7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RNF43Q68DV7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RNF43Q68DV7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.42■■□□□ 1.02
RNF43Q68DV7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF43Q68DV7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.42■■□□□ 1.02
RNF43Q68DV7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.42■■□□□ 1.02
RNF43Q68DV7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RNF43Q68DV7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
RNF43Q68DV7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
RNF43Q68DV7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.42■■□□□ 1.02
RNF43Q68DV7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF43Q68DV7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
RNF43Q68DV7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.42■■□□□ 1.02
RNF43Q68DV7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RNF43Q68DV7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
RNF43Q68DV7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF43Q68DV7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF43Q68DV7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.41■■□□□ 1.02
RNF43Q68DV7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF43Q68DV7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
RNF43Q68DV7 AC105036.2-201ENST00000569468 176 ntBASIC21.41■■□□□ 1.02
RNF43Q68DV7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF43Q68DV7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF43Q68DV7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF43Q68DV7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF43Q68DV7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF43Q68DV7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF43Q68DV7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
RNF43Q68DV7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF43Q68DV7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
RNF43Q68DV7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.4■■□□□ 1.02
RNF43Q68DV7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF43Q68DV7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF43Q68DV7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
RNF43Q68DV7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
RNF43Q68DV7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.4■■□□□ 1.02
RNF43Q68DV7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.4■■□□□ 1.02
RNF43Q68DV7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RNF43Q68DV7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF43Q68DV7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.4■■□□□ 1.02
RNF43Q68DV7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF43Q68DV7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF43Q68DV7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF43Q68DV7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF43Q68DV7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF43Q68DV7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.4■■□□□ 1.02
RNF43Q68DV7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.02
RNF43Q68DV7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
RNF43Q68DV7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RNF43Q68DV7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RNF43Q68DV7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.39■■□□□ 1.02
RNF43Q68DV7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.39■■□□□ 1.02
RNF43Q68DV7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF43Q68DV7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.39■■□□□ 1.01
RNF43Q68DV7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF43Q68DV7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RNF43Q68DV7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.01
RNF43Q68DV7 AC245052.3-201ENST00000450182 901 ntBASIC21.39■■□□□ 1.01
RNF43Q68DV7 RARRES2P4-201ENST00000514074 484 ntBASIC21.39■■□□□ 1.01
RNF43Q68DV7 AC016405.3-201ENST00000607710 860 ntBASIC21.39■■□□□ 1.01
RNF43Q68DV7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF43Q68DV7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RNF43Q68DV7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RNF43Q68DV7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.39■■□□□ 1.01
RNF43Q68DV7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.39■■□□□ 1.01
RNF43Q68DV7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RNF43Q68DV7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RNF43Q68DV7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
RNF43Q68DV7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RNF43Q68DV7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF43Q68DV7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF43Q68DV7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF43Q68DV7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF43Q68DV7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF43Q68DV7 RNA5SP413-201ENST00000516373 109 ntBASIC21.38■■□□□ 1.01
RNF43Q68DV7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF43Q68DV7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
RNF43Q68DV7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF43Q68DV7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RNF43Q68DV7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF43Q68DV7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
RNF43Q68DV7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF43Q68DV7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
RNF43Q68DV7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF43Q68DV7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RNF43Q68DV7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF43Q68DV7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RNF43Q68DV7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RNF43Q68DV7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.37■■□□□ 1.01
RNF43Q68DV7 AC093787.1-201ENST00000450396 207 ntBASIC21.37■■□□□ 1.01
RNF43Q68DV7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.37■■□□□ 1.01
RNF43Q68DV7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.37■■□□□ 1.01
RNF43Q68DV7 AC098934.4-201ENST00000564127 592 ntBASIC21.37■■□□□ 1.01
RNF43Q68DV7 AC069236.1-201ENST00000604339 616 ntBASIC21.37■■□□□ 1.01
RNF43Q68DV7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.37■■□□□ 1.01
RNF43Q68DV7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.37■■□□□ 1.01
RNF43Q68DV7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
RNF43Q68DV7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RNF43Q68DV7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms