Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 AL354811.1-201ENST00000610286 706 ntBASIC19.32■□□□□ 0.68
RUNDC3AQ59EK9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.32■□□□□ 0.68
RUNDC3AQ59EK9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RUNDC3AQ59EK9 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RUNDC3AQ59EK9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RUNDC3AQ59EK9 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RUNDC3AQ59EK9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.32■□□□□ 0.68
RUNDC3AQ59EK9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RUNDC3AQ59EK9 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RUNDC3AQ59EK9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.31■□□□□ 0.68
RUNDC3AQ59EK9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RUNDC3AQ59EK9 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.31■□□□□ 0.68
RUNDC3AQ59EK9 MIR2861-201ENST00000636310 90 ntBASIC19.31■□□□□ 0.68
RUNDC3AQ59EK9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
RUNDC3AQ59EK9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.31■□□□□ 0.68
RUNDC3AQ59EK9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RUNDC3AQ59EK9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.31■□□□□ 0.68
RUNDC3AQ59EK9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RUNDC3AQ59EK9 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RUNDC3AQ59EK9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RUNDC3AQ59EK9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.31■□□□□ 0.68
RUNDC3AQ59EK9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RUNDC3AQ59EK9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RUNDC3AQ59EK9 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 AC138907.5-202ENST00000569484 235 ntBASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 KRT16P2-201ENST00000414673 1423 ntBASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RUNDC3AQ59EK9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RUNDC3AQ59EK9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.29■□□□□ 0.68
RUNDC3AQ59EK9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RUNDC3AQ59EK9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RUNDC3AQ59EK9 KRT87P-202ENST00000534226 1464 ntBASIC19.29■□□□□ 0.68
RUNDC3AQ59EK9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.29■□□□□ 0.68
RUNDC3AQ59EK9 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RUNDC3AQ59EK9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RUNDC3AQ59EK9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RUNDC3AQ59EK9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.29■□□□□ 0.68
RUNDC3AQ59EK9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.29■□□□□ 0.68
RUNDC3AQ59EK9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RUNDC3AQ59EK9 AC245052.3-201ENST00000450182 901 ntBASIC19.29■□□□□ 0.68
RUNDC3AQ59EK9 AC110285.6-201ENST00000617652 491 ntBASIC19.29■□□□□ 0.68
RUNDC3AQ59EK9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RUNDC3AQ59EK9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RUNDC3AQ59EK9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RUNDC3AQ59EK9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RUNDC3AQ59EK9 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.28■□□□□ 0.68
RUNDC3AQ59EK9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RUNDC3AQ59EK9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RUNDC3AQ59EK9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.28■□□□□ 0.68
RUNDC3AQ59EK9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RUNDC3AQ59EK9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RUNDC3AQ59EK9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RUNDC3AQ59EK9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.28■□□□□ 0.68
RUNDC3AQ59EK9 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RUNDC3AQ59EK9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.28■□□□□ 0.68
RUNDC3AQ59EK9 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.28■□□□□ 0.68
RUNDC3AQ59EK9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.28■□□□□ 0.68
RUNDC3AQ59EK9 AC079140.4-201ENST00000507448 529 ntBASIC19.28■□□□□ 0.68
RUNDC3AQ59EK9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.28■□□□□ 0.68
RUNDC3AQ59EK9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RUNDC3AQ59EK9 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RUNDC3AQ59EK9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.28■□□□□ 0.68
RUNDC3AQ59EK9 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RUNDC3AQ59EK9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RUNDC3AQ59EK9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RUNDC3AQ59EK9 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RUNDC3AQ59EK9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RUNDC3AQ59EK9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RUNDC3AQ59EK9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.27■□□□□ 0.68
RUNDC3AQ59EK9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RUNDC3AQ59EK9 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.27■□□□□ 0.68
RUNDC3AQ59EK9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms