Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
ALFQ53S48 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.06■□□□□ 0.96
ALFQ53S48 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.06■□□□□ 0.96
ALFQ53S48 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ALFQ53S48 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ALFQ53S48 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.06■□□□□ 0.96
ALFQ53S48 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.06■□□□□ 0.96
ALFQ53S48 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.06■□□□□ 0.96
ALFQ53S48 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ALFQ53S48 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.06■□□□□ 0.96
ALFQ53S48 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.06■□□□□ 0.96
ALFQ53S48 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ALFQ53S48 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
ALFQ53S48 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ALFQ53S48 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.06■□□□□ 0.96
ALFQ53S48 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.05■□□□□ 0.96
ALFQ53S48 AC006128.1-201ENST00000624704 1661 ntBASIC21.05■□□□□ 0.96
ALFQ53S48 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.05■□□□□ 0.96
ALFQ53S48 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ALFQ53S48 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALFQ53S48 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.05■□□□□ 0.96
ALFQ53S48 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.05■□□□□ 0.96
ALFQ53S48 KRT18P68-201ENST00000392293 1000 ntBASIC21.05■□□□□ 0.96
ALFQ53S48 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ALFQ53S48 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ALFQ53S48 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.05■□□□□ 0.96
ALFQ53S48 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.05■□□□□ 0.96
ALFQ53S48 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.05■□□□□ 0.96
ALFQ53S48 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALFQ53S48 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALFQ53S48 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
ALFQ53S48 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALFQ53S48 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
ALFQ53S48 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ALFQ53S48 AC087633.2-202ENST00000565166 1439 ntBASIC21.04■□□□□ 0.96
ALFQ53S48 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.04■□□□□ 0.96
ALFQ53S48 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ALFQ53S48 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.04■□□□□ 0.96
ALFQ53S48 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
ALFQ53S48 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
ALFQ53S48 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ALFQ53S48 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
ALFQ53S48 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
ALFQ53S48 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ALFQ53S48 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.04■□□□□ 0.96
ALFQ53S48 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.04■□□□□ 0.96
ALFQ53S48 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
ALFQ53S48 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ALFQ53S48 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ALFQ53S48 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ALFQ53S48 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.03■□□□□ 0.96
ALFQ53S48 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ALFQ53S48 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.03■□□□□ 0.96
ALFQ53S48 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.03■□□□□ 0.96
ALFQ53S48 AC092118.2-201ENST00000613495 667 ntBASIC21.03■□□□□ 0.96
ALFQ53S48 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
ALFQ53S48 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.03■□□□□ 0.96
ALFQ53S48 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ALFQ53S48 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ALFQ53S48 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.03■□□□□ 0.96
ALFQ53S48 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ALFQ53S48 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ALFQ53S48 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.02■□□□□ 0.96
ALFQ53S48 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ALFQ53S48 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ALFQ53S48 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ALFQ53S48 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.02■□□□□ 0.96
ALFQ53S48 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ALFQ53S48 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ALFQ53S48 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
ALFQ53S48 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
ALFQ53S48 LSM12P1-201ENST00000411836 588 ntBASIC21.02■□□□□ 0.96
ALFQ53S48 AC069152.1-201ENST00000438030 544 ntBASIC21.02■□□□□ 0.96
ALFQ53S48 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.02■□□□□ 0.96
ALFQ53S48 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.02■□□□□ 0.96
ALFQ53S48 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.02■□□□□ 0.96
ALFQ53S48 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.02■□□□□ 0.96
ALFQ53S48 MIR4758-201ENST00000577688 71 ntBASIC21.02■□□□□ 0.96
ALFQ53S48 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
ALFQ53S48 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
ALFQ53S48 MIR2861-201ENST00000636310 90 ntBASIC21.02■□□□□ 0.96
ALFQ53S48 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ALFQ53S48 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
ALFQ53S48 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.02■□□□□ 0.96
ALFQ53S48 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.02■□□□□ 0.96
ALFQ53S48 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ALFQ53S48 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ALFQ53S48 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ALFQ53S48 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
ALFQ53S48 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ALFQ53S48 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.01■□□□□ 0.95
ALFQ53S48 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.01■□□□□ 0.95
ALFQ53S48 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ALFQ53S48 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ALFQ53S48 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
ALFQ53S48 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.01■□□□□ 0.95
ALFQ53S48 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ALFQ53S48 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.01■□□□□ 0.95
ALFQ53S48 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ALFQ53S48 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms