Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM60Q495X7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC22.63■■□□□ 1.21
TRIM60Q495X7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM60Q495X7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC22.63■■□□□ 1.21
TRIM60Q495X7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.63■■□□□ 1.21
TRIM60Q495X7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM60Q495X7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.63■■□□□ 1.21
TRIM60Q495X7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.63■■□□□ 1.21
TRIM60Q495X7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM60Q495X7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM60Q495X7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM60Q495X7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC22.62■■□□□ 1.21
TRIM60Q495X7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
TRIM60Q495X7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC22.62■■□□□ 1.21
TRIM60Q495X7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
TRIM60Q495X7 MIR6786-201ENST00000616843 113 ntBASIC22.62■■□□□ 1.21
TRIM60Q495X7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC22.62■■□□□ 1.21
TRIM60Q495X7 AC092865.7-201ENST00000641832 219 ntBASIC22.62■■□□□ 1.21
TRIM60Q495X7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM60Q495X7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
TRIM60Q495X7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM60Q495X7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.62■■□□□ 1.21
TRIM60Q495X7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.62■■□□□ 1.21
TRIM60Q495X7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.62■■□□□ 1.21
TRIM60Q495X7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.61■■□□□ 1.21
TRIM60Q495X7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.61■■□□□ 1.21
TRIM60Q495X7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM60Q495X7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM60Q495X7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM60Q495X7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM60Q495X7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM60Q495X7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
TRIM60Q495X7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM60Q495X7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM60Q495X7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.6■■□□□ 1.21
TRIM60Q495X7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM60Q495X7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM60Q495X7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM60Q495X7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
TRIM60Q495X7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
TRIM60Q495X7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM60Q495X7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM60Q495X7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC22.6■■□□□ 1.21
TRIM60Q495X7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC22.6■■□□□ 1.21
TRIM60Q495X7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC22.6■■□□□ 1.21
TRIM60Q495X7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC22.6■■□□□ 1.21
TRIM60Q495X7 AF186192.3-201ENST00000583427 947 ntBASIC22.6■■□□□ 1.21
TRIM60Q495X7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC22.6■■□□□ 1.21
TRIM60Q495X7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM60Q495X7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC22.6■■□□□ 1.21
TRIM60Q495X7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC22.6■■□□□ 1.21
TRIM60Q495X7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
TRIM60Q495X7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM60Q495X7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.6■■□□□ 1.21
TRIM60Q495X7 HTR7P1-201ENST00000538670 1336 ntBASIC22.59■■□□□ 1.21
TRIM60Q495X7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM60Q495X7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.59■■□□□ 1.21
TRIM60Q495X7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM60Q495X7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.59■■□□□ 1.21
TRIM60Q495X7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.59■■□□□ 1.21
TRIM60Q495X7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.59■■□□□ 1.21
TRIM60Q495X7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM60Q495X7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM60Q495X7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM60Q495X7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM60Q495X7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC22.59■■□□□ 1.21
TRIM60Q495X7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC22.59■■□□□ 1.21
TRIM60Q495X7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC22.59■■□□□ 1.21
TRIM60Q495X7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC22.59■■□□□ 1.21
TRIM60Q495X7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM60Q495X7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM60Q495X7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM60Q495X7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM60Q495X7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM60Q495X7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
TRIM60Q495X7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM60Q495X7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM60Q495X7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM60Q495X7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM60Q495X7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC22.58■■□□□ 1.21
TRIM60Q495X7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC22.58■■□□□ 1.21
TRIM60Q495X7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC22.58■■□□□ 1.21
TRIM60Q495X7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC22.58■■□□□ 1.21
TRIM60Q495X7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
TRIM60Q495X7 AC145285.6-201ENST00000604632 637 ntBASIC22.58■■□□□ 1.21
TRIM60Q495X7 AC005363.2-201ENST00000618631 242 ntBASIC22.58■■□□□ 1.21
TRIM60Q495X7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
TRIM60Q495X7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM60Q495X7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM60Q495X7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.57■■□□□ 1.2
TRIM60Q495X7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM60Q495X7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM60Q495X7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM60Q495X7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.57■■□□□ 1.2
TRIM60Q495X7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM60Q495X7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM60Q495X7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM60Q495X7 FAM197Y1-201ENST00000421178 764 ntBASIC22.57■■□□□ 1.2
TRIM60Q495X7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.57■■□□□ 1.2
TRIM60Q495X7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms