Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC24.03■■□□□ 1.44
SHROOM1Q2M3G4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SHROOM1Q2M3G4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
SHROOM1Q2M3G4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SHROOM1Q2M3G4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SHROOM1Q2M3G4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SHROOM1Q2M3G4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SHROOM1Q2M3G4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC24.02■■□□□ 1.44
SHROOM1Q2M3G4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC24.02■■□□□ 1.44
SHROOM1Q2M3G4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
SHROOM1Q2M3G4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SHROOM1Q2M3G4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC24.02■■□□□ 1.44
SHROOM1Q2M3G4 AC006557.6-201ENST00000623071 864 ntBASIC24.02■■□□□ 1.44
SHROOM1Q2M3G4 AL024507.2-201ENST00000606070 2574 ntBASIC24.02■■□□□ 1.44
SHROOM1Q2M3G4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
SHROOM1Q2M3G4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SHROOM1Q2M3G4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SHROOM1Q2M3G4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SHROOM1Q2M3G4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC24.02■■□□□ 1.43
SHROOM1Q2M3G4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
SHROOM1Q2M3G4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC24.01■■□□□ 1.43
SHROOM1Q2M3G4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SHROOM1Q2M3G4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC24.01■■□□□ 1.43
SHROOM1Q2M3G4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
SHROOM1Q2M3G4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SHROOM1Q2M3G4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC24.01■■□□□ 1.43
SHROOM1Q2M3G4 AL356652.1-201ENST00000615962 565 ntBASIC24.01■■□□□ 1.43
SHROOM1Q2M3G4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SHROOM1Q2M3G4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SHROOM1Q2M3G4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
SHROOM1Q2M3G4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC24.01■■□□□ 1.43
SHROOM1Q2M3G4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC24■■□□□ 1.43
SHROOM1Q2M3G4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
SHROOM1Q2M3G4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC24■■□□□ 1.43
SHROOM1Q2M3G4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SHROOM1Q2M3G4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC24■■□□□ 1.43
SHROOM1Q2M3G4 KRT17P3-201ENST00000420566 1262 ntBASIC24■■□□□ 1.43
SHROOM1Q2M3G4 POM121L13P-201ENST00000422362 380 ntBASIC24■■□□□ 1.43
SHROOM1Q2M3G4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC24■■□□□ 1.43
SHROOM1Q2M3G4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
SHROOM1Q2M3G4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC24■■□□□ 1.43
SHROOM1Q2M3G4 Z99916.2-201ENST00000604037 246 ntBASIC24■■□□□ 1.43
SHROOM1Q2M3G4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
SHROOM1Q2M3G4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24■■□□□ 1.43
SHROOM1Q2M3G4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24■■□□□ 1.43
SHROOM1Q2M3G4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
SHROOM1Q2M3G4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC24■■□□□ 1.43
SHROOM1Q2M3G4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC24■■□□□ 1.43
SHROOM1Q2M3G4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SHROOM1Q2M3G4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24■■□□□ 1.43
SHROOM1Q2M3G4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
SHROOM1Q2M3G4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC23.99■■□□□ 1.43
SHROOM1Q2M3G4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SHROOM1Q2M3G4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
SHROOM1Q2M3G4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SHROOM1Q2M3G4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC23.99■■□□□ 1.43
SHROOM1Q2M3G4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SHROOM1Q2M3G4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC23.99■■□□□ 1.43
SHROOM1Q2M3G4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SHROOM1Q2M3G4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SHROOM1Q2M3G4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SHROOM1Q2M3G4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
SHROOM1Q2M3G4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SHROOM1Q2M3G4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC23.98■■□□□ 1.43
SHROOM1Q2M3G4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SHROOM1Q2M3G4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC23.98■■□□□ 1.43
SHROOM1Q2M3G4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.98■■□□□ 1.43
SHROOM1Q2M3G4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SHROOM1Q2M3G4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SHROOM1Q2M3G4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SHROOM1Q2M3G4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SHROOM1Q2M3G4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
SHROOM1Q2M3G4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC23.98■■□□□ 1.43
SHROOM1Q2M3G4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC23.98■■□□□ 1.43
SHROOM1Q2M3G4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC23.98■■□□□ 1.43
SHROOM1Q2M3G4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC23.98■■□□□ 1.43
SHROOM1Q2M3G4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC23.98■■□□□ 1.43
SHROOM1Q2M3G4 FAM197Y4-202ENST00000622692 608 ntBASIC23.98■■□□□ 1.43
SHROOM1Q2M3G4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SHROOM1Q2M3G4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SHROOM1Q2M3G4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC23.98■■□□□ 1.43
SHROOM1Q2M3G4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC23.98■■□□□ 1.43
SHROOM1Q2M3G4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
SHROOM1Q2M3G4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
SHROOM1Q2M3G4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SHROOM1Q2M3G4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC23.98■■□□□ 1.43
SHROOM1Q2M3G4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
SHROOM1Q2M3G4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SHROOM1Q2M3G4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SHROOM1Q2M3G4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SHROOM1Q2M3G4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SHROOM1Q2M3G4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SHROOM1Q2M3G4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SHROOM1Q2M3G4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SHROOM1Q2M3G4 UBE2SP1-201ENST00000450587 669 ntBASIC23.97■■□□□ 1.43
SHROOM1Q2M3G4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
SHROOM1Q2M3G4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SHROOM1Q2M3G4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.97■■□□□ 1.43
SHROOM1Q2M3G4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.97■■□□□ 1.43
SHROOM1Q2M3G4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms