Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH1Q08174 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.74■□□□□ 0.75
PCDH1Q08174 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PCDH1Q08174 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH1Q08174 AC013268.1-206ENST00000638368 961 ntBASIC19.74■□□□□ 0.75
PCDH1Q08174 AC112229.1-201ENST00000639295 961 ntBASIC19.74■□□□□ 0.75
PCDH1Q08174 AL162377.1-201ENST00000618844 1793 ntBASIC19.74■□□□□ 0.75
PCDH1Q08174 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH1Q08174 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH1Q08174 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PCDH1Q08174 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PCDH1Q08174 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PCDH1Q08174 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH1Q08174 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH1Q08174 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH1Q08174 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH1Q08174 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH1Q08174 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PCDH1Q08174 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH1Q08174 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH1Q08174 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH1Q08174 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH1Q08174 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
PCDH1Q08174 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDH1Q08174 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PCDH1Q08174 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH1Q08174 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDH1Q08174 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDH1Q08174 AC137761.2-201ENST00000561729 223 ntBASIC19.73■□□□□ 0.75
PCDH1Q08174 AC145350.3-201ENST00000569033 163 ntBASIC19.73■□□□□ 0.75
PCDH1Q08174 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.73■□□□□ 0.75
PCDH1Q08174 MFSD11-216ENST00000590393 1141 ntBASIC19.73■□□□□ 0.75
PCDH1Q08174 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH1Q08174 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PCDH1Q08174 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH1Q08174 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.73■□□□□ 0.75
PCDH1Q08174 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH1Q08174 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH1Q08174 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH1Q08174 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PCDH1Q08174 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PCDH1Q08174 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH1Q08174 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH1Q08174 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDH1Q08174 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDH1Q08174 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH1Q08174 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH1Q08174 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDH1Q08174 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH1Q08174 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH1Q08174 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH1Q08174 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDH1Q08174 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
PCDH1Q08174 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH1Q08174 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH1Q08174 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH1Q08174 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.72■□□□□ 0.75
PCDH1Q08174 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH1Q08174 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH1Q08174 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH1Q08174 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH1Q08174 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDH1Q08174 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH1Q08174 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH1Q08174 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDH1Q08174 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH1Q08174 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDH1Q08174 KRT8P36-201ENST00000489121 1440 ntBASIC19.71■□□□□ 0.75
PCDH1Q08174 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
PCDH1Q08174 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH1Q08174 AC073130.3-201ENST00000624389 2278 ntBASIC19.71■□□□□ 0.75
PCDH1Q08174 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH1Q08174 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH1Q08174 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH1Q08174 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH1Q08174 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH1Q08174 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH1Q08174 AL162430.1-201ENST00000480705 870 ntBASIC19.71■□□□□ 0.75
PCDH1Q08174 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.71■□□□□ 0.75
PCDH1Q08174 DUX4L16-201ENST00000555130 1264 ntBASIC19.71■□□□□ 0.75
PCDH1Q08174 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH1Q08174 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.71■□□□□ 0.75
PCDH1Q08174 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PCDH1Q08174 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
PCDH1Q08174 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PCDH1Q08174 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDH1Q08174 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.71■□□□□ 0.75
PCDH1Q08174 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH1Q08174 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PCDH1Q08174 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH1Q08174 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH1Q08174 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDH1Q08174 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.7■□□□□ 0.74
PCDH1Q08174 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDH1Q08174 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDH1Q08174 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDH1Q08174 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH1Q08174 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.7■□□□□ 0.74
PCDH1Q08174 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDH1Q08174 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms