Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 LINC01006-201ENST00000333319 2292 ntBASIC20.58■□□□□ 0.89
PRAMEP78395 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PRAMEP78395 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.58■□□□□ 0.89
PRAMEP78395 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRAMEP78395 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.58■□□□□ 0.89
PRAMEP78395 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.58■□□□□ 0.89
PRAMEP78395 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PRAMEP78395 AC091799.1-201ENST00000422823 811 ntBASIC20.58■□□□□ 0.89
PRAMEP78395 AC137761.2-201ENST00000561729 223 ntBASIC20.58■□□□□ 0.89
PRAMEP78395 AC145350.3-201ENST00000569033 163 ntBASIC20.58■□□□□ 0.89
PRAMEP78395 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PRAMEP78395 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.58■□□□□ 0.89
PRAMEP78395 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PRAMEP78395 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.58■□□□□ 0.88
PRAMEP78395 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.58■□□□□ 0.88
PRAMEP78395 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PRAMEP78395 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PRAMEP78395 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PRAMEP78395 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.58■□□□□ 0.88
PRAMEP78395 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PRAMEP78395 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PRAMEP78395 LINC01521-201ENST00000504184 1943 ntBASIC20.57■□□□□ 0.88
PRAMEP78395 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEP78395 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEP78395 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEP78395 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEP78395 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEP78395 KRT18P11-201ENST00000435214 1283 ntBASIC20.57■□□□□ 0.88
PRAMEP78395 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEP78395 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.57■□□□□ 0.88
PRAMEP78395 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PRAMEP78395 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PRAMEP78395 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.57■□□□□ 0.88
PRAMEP78395 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEP78395 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.56■□□□□ 0.88
PRAMEP78395 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEP78395 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEP78395 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.56■□□□□ 0.88
PRAMEP78395 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEP78395 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEP78395 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PRAMEP78395 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.56■□□□□ 0.88
PRAMEP78395 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.56■□□□□ 0.88
PRAMEP78395 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.56■□□□□ 0.88
PRAMEP78395 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
PRAMEP78395 MIR5787-201ENST00000611784 55 ntBASIC20.56■□□□□ 0.88
PRAMEP78395 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PRAMEP78395 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PRAMEP78395 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PRAMEP78395 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEP78395 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEP78395 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.56■□□□□ 0.88
PRAMEP78395 AC027702.1-201ENST00000563810 1770 ntBASIC20.56■□□□□ 0.88
PRAMEP78395 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEP78395 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PRAMEP78395 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEP78395 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEP78395 AC073314.1-201ENST00000568729 2216 ntBASIC20.55■□□□□ 0.88
PRAMEP78395 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PRAMEP78395 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEP78395 AC092667.1-201ENST00000434301 2586 ntBASIC20.55■□□□□ 0.88
PRAMEP78395 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEP78395 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEP78395 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
PRAMEP78395 AC016769.1-201ENST00000409132 1010 ntBASIC20.55■□□□□ 0.88
PRAMEP78395 AC007322.3-201ENST00000426526 701 ntBASIC20.55■□□□□ 0.88
PRAMEP78395 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.55■□□□□ 0.88
PRAMEP78395 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.55■□□□□ 0.88
PRAMEP78395 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.55■□□□□ 0.88
PRAMEP78395 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.55■□□□□ 0.88
PRAMEP78395 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEP78395 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEP78395 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.55■□□□□ 0.88
PRAMEP78395 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.55■□□□□ 0.88
PRAMEP78395 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEP78395 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEP78395 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PRAMEP78395 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PRAMEP78395 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEP78395 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEP78395 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEP78395 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEP78395 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEP78395 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEP78395 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.54■□□□□ 0.88
PRAMEP78395 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEP78395 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEP78395 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEP78395 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.54■□□□□ 0.88
PRAMEP78395 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PRAMEP78395 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEP78395 CDV3P1-201ENST00000471403 739 ntBASIC20.54■□□□□ 0.88
PRAMEP78395 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.54■□□□□ 0.88
PRAMEP78395 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.54■□□□□ 0.88
PRAMEP78395 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEP78395 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.54■□□□□ 0.88
PRAMEP78395 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEP78395 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEP78395 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEP78395 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms