Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.9■□□□□ 0.46
HIST1H3AP68431 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HIST1H3AP68431 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
HIST1H3AP68431 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
HIST1H3AP68431 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
HIST1H3AP68431 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.89■□□□□ 0.45
HIST1H3AP68431 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST1H3AP68431 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HIST1H3AP68431 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.89■□□□□ 0.45
HIST1H3AP68431 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.89■□□□□ 0.45
HIST1H3AP68431 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HIST1H3AP68431 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HIST1H3AP68431 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.89■□□□□ 0.45
HIST1H3AP68431 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HIST1H3AP68431 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST1H3AP68431 AL591742.1-201ENST00000604433 565 ntBASIC17.89■□□□□ 0.45
HIST1H3AP68431 FAM21FP-204ENST00000608637 956 ntBASIC17.89■□□□□ 0.45
HIST1H3AP68431 MIR5787-201ENST00000611784 55 ntBASIC17.89■□□□□ 0.45
HIST1H3AP68431 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HIST1H3AP68431 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.89■□□□□ 0.45
HIST1H3AP68431 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.89■□□□□ 0.45
HIST1H3AP68431 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.89■□□□□ 0.45
HIST1H3AP68431 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HIST1H3AP68431 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST1H3AP68431 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST1H3AP68431 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HIST1H3AP68431 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST1H3AP68431 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST1H3AP68431 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HIST1H3AP68431 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST1H3AP68431 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST1H3AP68431 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIST1H3AP68431 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.89■□□□□ 0.45
HIST1H3AP68431 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
HIST1H3AP68431 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HIST1H3AP68431 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.88■□□□□ 0.45
HIST1H3AP68431 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HIST1H3AP68431 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HIST1H3AP68431 AL162430.1-201ENST00000480705 870 ntBASIC17.88■□□□□ 0.45
HIST1H3AP68431 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.88■□□□□ 0.45
HIST1H3AP68431 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HIST1H3AP68431 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.88■□□□□ 0.45
HIST1H3AP68431 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.88■□□□□ 0.45
HIST1H3AP68431 AC013268.1-206ENST00000638368 961 ntBASIC17.88■□□□□ 0.45
HIST1H3AP68431 AC112229.1-201ENST00000639295 961 ntBASIC17.88■□□□□ 0.45
HIST1H3AP68431 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.88■□□□□ 0.45
HIST1H3AP68431 AL162377.1-201ENST00000618844 1793 ntBASIC17.88■□□□□ 0.45
HIST1H3AP68431 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.88■□□□□ 0.45
HIST1H3AP68431 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HIST1H3AP68431 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.88■□□□□ 0.45
HIST1H3AP68431 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.88■□□□□ 0.45
HIST1H3AP68431 SLC25A24-204ENST00000569674 2357 ntBASIC17.88■□□□□ 0.45
HIST1H3AP68431 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIST1H3AP68431 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIST1H3AP68431 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIST1H3AP68431 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIST1H3AP68431 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HIST1H3AP68431 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIST1H3AP68431 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIST1H3AP68431 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.87■□□□□ 0.45
HIST1H3AP68431 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.87■□□□□ 0.45
HIST1H3AP68431 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
HIST1H3AP68431 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HIST1H3AP68431 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
HIST1H3AP68431 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.87■□□□□ 0.45
HIST1H3AP68431 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HIST1H3AP68431 KRT8P36-201ENST00000489121 1440 ntBASIC17.87■□□□□ 0.45
HIST1H3AP68431 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIST1H3AP68431 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
HIST1H3AP68431 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIST1H3AP68431 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.87■□□□□ 0.45
HIST1H3AP68431 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIST1H3AP68431 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HIST1H3AP68431 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
HIST1H3AP68431 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
HIST1H3AP68431 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.86■□□□□ 0.45
HIST1H3AP68431 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
HIST1H3AP68431 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HIST1H3AP68431 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.86■□□□□ 0.45
HIST1H3AP68431 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HIST1H3AP68431 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HIST1H3AP68431 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.86■□□□□ 0.45
HIST1H3AP68431 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HIST1H3AP68431 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.86■□□□□ 0.45
HIST1H3AP68431 DUX4L16-201ENST00000555130 1264 ntBASIC17.86■□□□□ 0.45
HIST1H3AP68431 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.86■□□□□ 0.45
HIST1H3AP68431 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.86■□□□□ 0.45
HIST1H3AP68431 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HIST1H3AP68431 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HIST1H3AP68431 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
HIST1H3AP68431 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HIST1H3AP68431 AC092720.2-201ENST00000602388 1665 ntBASIC17.86■□□□□ 0.45
HIST1H3AP68431 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HIST1H3AP68431 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
HIST1H3AP68431 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HIST1H3AP68431 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HIST1H3AP68431 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.85■□□□□ 0.45
HIST1H3AP68431 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
HIST1H3AP68431 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HIST1H3AP68431 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms