Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.49■□□□□ 0.55
RPS4XP62701 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4XP62701 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.49■□□□□ 0.55
RPS4XP62701 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.49■□□□□ 0.55
RPS4XP62701 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.49■□□□□ 0.55
RPS4XP62701 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.49■□□□□ 0.55
RPS4XP62701 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.49■□□□□ 0.55
RPS4XP62701 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4XP62701 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.49■□□□□ 0.55
RPS4XP62701 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.49■□□□□ 0.55
RPS4XP62701 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4XP62701 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4XP62701 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4XP62701 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.49■□□□□ 0.55
RPS4XP62701 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RPS4XP62701 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4XP62701 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4XP62701 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
RPS4XP62701 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4XP62701 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4XP62701 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.49■□□□□ 0.55
RPS4XP62701 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
RPS4XP62701 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4XP62701 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4XP62701 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RPS4XP62701 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RPS4XP62701 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.48■□□□□ 0.55
RPS4XP62701 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4XP62701 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4XP62701 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RPS4XP62701 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4XP62701 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RPS4XP62701 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.48■□□□□ 0.55
RPS4XP62701 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.48■□□□□ 0.55
RPS4XP62701 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.48■□□□□ 0.55
RPS4XP62701 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.48■□□□□ 0.55
RPS4XP62701 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.48■□□□□ 0.55
RPS4XP62701 AC011767.1-201ENST00000617410 1153 ntBASIC18.48■□□□□ 0.55
RPS4XP62701 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4XP62701 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4XP62701 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.48■□□□□ 0.55
RPS4XP62701 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.48■□□□□ 0.55
RPS4XP62701 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RPS4XP62701 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.48■□□□□ 0.55
RPS4XP62701 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4XP62701 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4XP62701 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPS4XP62701 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.47■□□□□ 0.55
RPS4XP62701 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.47■□□□□ 0.55
RPS4XP62701 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPS4XP62701 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.47■□□□□ 0.55
RPS4XP62701 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPS4XP62701 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPS4XP62701 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPS4XP62701 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.47■□□□□ 0.55
RPS4XP62701 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPS4XP62701 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RPS4XP62701 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.47■□□□□ 0.55
RPS4XP62701 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.47■□□□□ 0.55
RPS4XP62701 AL512408.1-201ENST00000569378 2000 ntBASIC18.47■□□□□ 0.55
RPS4XP62701 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RPS4XP62701 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RPS4XP62701 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RPS4XP62701 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPS4XP62701 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.46■□□□□ 0.55
RPS4XP62701 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPS4XP62701 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RPS4XP62701 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPS4XP62701 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RPS4XP62701 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.46■□□□□ 0.55
RPS4XP62701 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.46■□□□□ 0.55
RPS4XP62701 RBM17P2-201ENST00000616397 1405 ntBASIC18.46■□□□□ 0.55
RPS4XP62701 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPS4XP62701 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
RPS4XP62701 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.46■□□□□ 0.55
RPS4XP62701 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RPS4XP62701 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.54
RPS4XP62701 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPS4XP62701 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPS4XP62701 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RPS4XP62701 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RPS4XP62701 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPS4XP62701 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RPS4XP62701 AC091799.1-201ENST00000422823 811 ntBASIC18.45■□□□□ 0.54
RPS4XP62701 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.45■□□□□ 0.54
RPS4XP62701 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.45■□□□□ 0.54
RPS4XP62701 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RPS4XP62701 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.45■□□□□ 0.54
RPS4XP62701 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.45■□□□□ 0.54
RPS4XP62701 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPS4XP62701 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPS4XP62701 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RPS4XP62701 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPS4XP62701 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPS4XP62701 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPS4XP62701 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RPS4XP62701 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPS4XP62701 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPS4XP62701 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPS4XP62701 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms