Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC42P60953 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDC42P60953 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDC42P60953 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.67■□□□□ 0.58
CDC42P60953 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CDC42P60953 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CDC42P60953 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CDC42P60953 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC42P60953 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC42P60953 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.66■□□□□ 0.58
CDC42P60953 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.66■□□□□ 0.58
CDC42P60953 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CDC42P60953 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC42P60953 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC42P60953 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.66■□□□□ 0.58
CDC42P60953 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.66■□□□□ 0.58
CDC42P60953 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC42P60953 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.66■□□□□ 0.58
CDC42P60953 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC42P60953 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.66■□□□□ 0.58
CDC42P60953 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC42P60953 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.66■□□□□ 0.58
CDC42P60953 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC42P60953 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CDC42P60953 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.65■□□□□ 0.58
CDC42P60953 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42P60953 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42P60953 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42P60953 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CDC42P60953 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42P60953 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42P60953 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42P60953 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CDC42P60953 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDC42P60953 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42P60953 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42P60953 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.65■□□□□ 0.58
CDC42P60953 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CDC42P60953 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.65■□□□□ 0.58
CDC42P60953 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.65■□□□□ 0.58
CDC42P60953 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CDC42P60953 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.65■□□□□ 0.58
CDC42P60953 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42P60953 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.65■□□□□ 0.58
CDC42P60953 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.65■□□□□ 0.58
CDC42P60953 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42P60953 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42P60953 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42P60953 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC42P60953 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CDC42P60953 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDC42P60953 AC018445.3-201ENST00000624177 1945 ntBASIC18.64■□□□□ 0.58
CDC42P60953 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDC42P60953 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC42P60953 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CDC42P60953 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC42P60953 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDC42P60953 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CDC42P60953 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.64■□□□□ 0.57
CDC42P60953 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC42P60953 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC42P60953 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CDC42P60953 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC42P60953 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC42P60953 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.64■□□□□ 0.57
CDC42P60953 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC42P60953 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.64■□□□□ 0.57
CDC42P60953 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC42P60953 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CDC42P60953 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CDC42P60953 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
CDC42P60953 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42P60953 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42P60953 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42P60953 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42P60953 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.63■□□□□ 0.57
CDC42P60953 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42P60953 GUSBP5-201ENST00000418136 578 ntBASIC18.63■□□□□ 0.57
CDC42P60953 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.63■□□□□ 0.57
CDC42P60953 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CDC42P60953 AC133561.4-201ENST00000566112 224 ntBASIC18.63■□□□□ 0.57
CDC42P60953 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CDC42P60953 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42P60953 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CDC42P60953 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.63■□□□□ 0.57
CDC42P60953 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.63■□□□□ 0.57
CDC42P60953 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42P60953 AP004607.4-201ENST00000530158 1459 ntBASIC18.63■□□□□ 0.57
CDC42P60953 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.63■□□□□ 0.57
CDC42P60953 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42P60953 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42P60953 BX323043.1-201ENST00000641006 1765 ntBASIC18.63■□□□□ 0.57
CDC42P60953 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.63■□□□□ 0.57
CDC42P60953 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC42P60953 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.62■□□□□ 0.57
CDC42P60953 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC42P60953 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.62■□□□□ 0.57
CDC42P60953 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
CDC42P60953 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.62■□□□□ 0.57
CDC42P60953 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms