Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.72■□□□□ 0.75
CLDN6P56747 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN6P56747 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN6P56747 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN6P56747 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN6P56747 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.72■□□□□ 0.75
CLDN6P56747 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN6P56747 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.72■□□□□ 0.75
CLDN6P56747 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CLDN6P56747 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN6P56747 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN6P56747 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.71■□□□□ 0.75
CLDN6P56747 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CLDN6P56747 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN6P56747 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CLDN6P56747 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.71■□□□□ 0.75
CLDN6P56747 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN6P56747 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CLDN6P56747 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.71■□□□□ 0.75
CLDN6P56747 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CLDN6P56747 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.71■□□□□ 0.75
CLDN6P56747 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.71■□□□□ 0.75
CLDN6P56747 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN6P56747 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CLDN6P56747 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.71■□□□□ 0.75
CLDN6P56747 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CLDN6P56747 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.71■□□□□ 0.75
CLDN6P56747 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.71■□□□□ 0.75
CLDN6P56747 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN6P56747 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN6P56747 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.71■□□□□ 0.75
CLDN6P56747 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CLDN6P56747 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CLDN6P56747 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN6P56747 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.71■□□□□ 0.75
CLDN6P56747 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN6P56747 AC079834.2-201ENST00000609776 1949 ntBASIC19.7■□□□□ 0.74
CLDN6P56747 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN6P56747 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.7■□□□□ 0.74
CLDN6P56747 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN6P56747 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN6P56747 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN6P56747 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CLDN6P56747 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN6P56747 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN6P56747 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.7■□□□□ 0.74
CLDN6P56747 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CLDN6P56747 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.7■□□□□ 0.74
CLDN6P56747 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
CLDN6P56747 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN6P56747 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN6P56747 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN6P56747 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN6P56747 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN6P56747 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.69■□□□□ 0.74
CLDN6P56747 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.69■□□□□ 0.74
CLDN6P56747 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.69■□□□□ 0.74
CLDN6P56747 AC120498.8-201ENST00000614275 531 ntBASIC19.69■□□□□ 0.74
CLDN6P56747 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN6P56747 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN6P56747 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.69■□□□□ 0.74
CLDN6P56747 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.69■□□□□ 0.74
CLDN6P56747 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.69■□□□□ 0.74
CLDN6P56747 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN6P56747 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN6P56747 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN6P56747 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CLDN6P56747 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.68■□□□□ 0.74
CLDN6P56747 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.68■□□□□ 0.74
CLDN6P56747 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN6P56747 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.68■□□□□ 0.74
CLDN6P56747 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN6P56747 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN6P56747 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN6P56747 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.68■□□□□ 0.74
CLDN6P56747 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.68■□□□□ 0.74
CLDN6P56747 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.68■□□□□ 0.74
CLDN6P56747 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.68■□□□□ 0.74
CLDN6P56747 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.68■□□□□ 0.74
CLDN6P56747 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN6P56747 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN6P56747 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN6P56747 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN6P56747 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.68■□□□□ 0.74
CLDN6P56747 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN6P56747 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.68■□□□□ 0.74
CLDN6P56747 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.68■□□□□ 0.74
CLDN6P56747 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN6P56747 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN6P56747 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN6P56747 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN6P56747 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN6P56747 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN6P56747 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.67■□□□□ 0.74
CLDN6P56747 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN6P56747 AC133681.1-201ENST00000465482 601 ntBASIC19.67■□□□□ 0.74
CLDN6P56747 MIR4785-201ENST00000585005 73 ntBASIC19.67■□□□□ 0.74
CLDN6P56747 AC110285.5-201ENST00000611501 352 ntBASIC19.67■□□□□ 0.74
CLDN6P56747 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.67■□□□□ 0.74
CLDN6P56747 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms