Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PER3P56645 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.86■□□□□ 0.61
PER3P56645 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.86■□□□□ 0.61
PER3P56645 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.86■□□□□ 0.61
PER3P56645 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PER3P56645 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PER3P56645 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PER3P56645 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PER3P56645 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PER3P56645 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.86■□□□□ 0.61
PER3P56645 AL596275.1-201ENST00000423464 877 ntBASIC18.86■□□□□ 0.61
PER3P56645 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PER3P56645 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.86■□□□□ 0.61
PER3P56645 AC091874.3-201ENST00000512672 1195 ntBASIC18.86■□□□□ 0.61
PER3P56645 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.86■□□□□ 0.61
PER3P56645 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.86■□□□□ 0.61
PER3P56645 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.86■□□□□ 0.61
PER3P56645 AL162412.1-201ENST00000567129 965 ntBASIC18.86■□□□□ 0.61
PER3P56645 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.86■□□□□ 0.61
PER3P56645 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PER3P56645 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PER3P56645 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.86■□□□□ 0.61
PER3P56645 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PER3P56645 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PER3P56645 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PER3P56645 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PER3P56645 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PER3P56645 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PER3P56645 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PER3P56645 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PER3P56645 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PER3P56645 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.85■□□□□ 0.61
PER3P56645 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.85■□□□□ 0.61
PER3P56645 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PER3P56645 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PER3P56645 AF106564.1-201ENST00000607058 2553 ntBASIC18.85■□□□□ 0.61
PER3P56645 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PER3P56645 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PER3P56645 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PER3P56645 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PER3P56645 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.85■□□□□ 0.61
PER3P56645 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.85■□□□□ 0.61
PER3P56645 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PER3P56645 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.85■□□□□ 0.61
PER3P56645 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PER3P56645 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.85■□□□□ 0.61
PER3P56645 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PER3P56645 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.84■□□□□ 0.61
PER3P56645 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PER3P56645 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.84■□□□□ 0.61
PER3P56645 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.84■□□□□ 0.61
PER3P56645 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PER3P56645 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PER3P56645 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.84■□□□□ 0.61
PER3P56645 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.84■□□□□ 0.61
PER3P56645 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.84■□□□□ 0.61
PER3P56645 AC026366.1-201ENST00000488803 879 ntBASIC18.84■□□□□ 0.61
PER3P56645 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.84■□□□□ 0.61
PER3P56645 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.84■□□□□ 0.61
PER3P56645 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PER3P56645 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PER3P56645 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PER3P56645 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PER3P56645 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PER3P56645 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.84■□□□□ 0.61
PER3P56645 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PER3P56645 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PER3P56645 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PER3P56645 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PER3P56645 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PER3P56645 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PER3P56645 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.83■□□□□ 0.61
PER3P56645 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PER3P56645 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PER3P56645 MIR718-201ENST00000390190 70 ntBASIC18.83■□□□□ 0.6
PER3P56645 POU5F1P4-201ENST00000413175 1085 ntBASIC18.83■□□□□ 0.6
PER3P56645 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.83■□□□□ 0.6
PER3P56645 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PER3P56645 UBE2SP1-201ENST00000450587 669 ntBASIC18.83■□□□□ 0.6
PER3P56645 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.83■□□□□ 0.6
PER3P56645 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
PER3P56645 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.83■□□□□ 0.6
PER3P56645 AL591742.1-201ENST00000604433 565 ntBASIC18.83■□□□□ 0.6
PER3P56645 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.83■□□□□ 0.6
PER3P56645 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PER3P56645 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PER3P56645 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PER3P56645 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PER3P56645 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PER3P56645 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PER3P56645 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PER3P56645 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PER3P56645 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PER3P56645 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PER3P56645 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PER3P56645 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PER3P56645 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.82■□□□□ 0.6
PER3P56645 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PER3P56645 AP003097.1-201ENST00000530657 1135 ntBASIC18.82■□□□□ 0.6
PER3P56645 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms