Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SUMO3P55854 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SUMO3P55854 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.55■□□□□ 0.56
SUMO3P55854 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.55■□□□□ 0.56
SUMO3P55854 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.55■□□□□ 0.56
SUMO3P55854 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.55■□□□□ 0.56
SUMO3P55854 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.55■□□□□ 0.56
SUMO3P55854 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.55■□□□□ 0.56
SUMO3P55854 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.55■□□□□ 0.56
SUMO3P55854 AL121832.2-201ENST00000610979 668 ntBASIC18.55■□□□□ 0.56
SUMO3P55854 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SUMO3P55854 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SUMO3P55854 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.55■□□□□ 0.56
SUMO3P55854 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SUMO3P55854 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SUMO3P55854 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SUMO3P55854 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
SUMO3P55854 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SUMO3P55854 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SUMO3P55854 KRT18P68-201ENST00000392293 1000 ntBASIC18.54■□□□□ 0.56
SUMO3P55854 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.54■□□□□ 0.56
SUMO3P55854 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.54■□□□□ 0.56
SUMO3P55854 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.54■□□□□ 0.56
SUMO3P55854 AC093787.1-201ENST00000450396 207 ntBASIC18.54■□□□□ 0.56
SUMO3P55854 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.54■□□□□ 0.56
SUMO3P55854 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.54■□□□□ 0.56
SUMO3P55854 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SUMO3P55854 AC105036.2-201ENST00000569468 176 ntBASIC18.54■□□□□ 0.56
SUMO3P55854 AC105020.6-201ENST00000621523 1217 ntBASIC18.54■□□□□ 0.56
SUMO3P55854 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SUMO3P55854 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.54■□□□□ 0.56
SUMO3P55854 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SUMO3P55854 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SUMO3P55854 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SUMO3P55854 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SUMO3P55854 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.53■□□□□ 0.56
SUMO3P55854 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SUMO3P55854 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.53■□□□□ 0.56
SUMO3P55854 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SUMO3P55854 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SUMO3P55854 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SUMO3P55854 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SUMO3P55854 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SUMO3P55854 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.53■□□□□ 0.56
SUMO3P55854 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SUMO3P55854 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SUMO3P55854 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.53■□□□□ 0.56
SUMO3P55854 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.53■□□□□ 0.56
SUMO3P55854 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SUMO3P55854 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.53■□□□□ 0.56
SUMO3P55854 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.53■□□□□ 0.56
SUMO3P55854 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
SUMO3P55854 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SUMO3P55854 AL589743.5-201ENST00000616611 1050 ntBASIC18.53■□□□□ 0.56
SUMO3P55854 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
SUMO3P55854 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SUMO3P55854 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.53■□□□□ 0.56
SUMO3P55854 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.53■□□□□ 0.56
SUMO3P55854 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SUMO3P55854 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SUMO3P55854 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SUMO3P55854 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SUMO3P55854 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.52■□□□□ 0.56
SUMO3P55854 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SUMO3P55854 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SUMO3P55854 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SUMO3P55854 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SUMO3P55854 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
SUMO3P55854 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SUMO3P55854 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SUMO3P55854 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SUMO3P55854 MKRN4P-201ENST00000444706 1521 ntBASIC18.52■□□□□ 0.56
SUMO3P55854 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SUMO3P55854 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.55
SUMO3P55854 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.52■□□□□ 0.55
SUMO3P55854 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
SUMO3P55854 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SUMO3P55854 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SUMO3P55854 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SUMO3P55854 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
SUMO3P55854 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUMO3P55854 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SUMO3P55854 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUMO3P55854 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.51■□□□□ 0.55
SUMO3P55854 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.51■□□□□ 0.55
SUMO3P55854 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUMO3P55854 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUMO3P55854 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SUMO3P55854 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUMO3P55854 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.51■□□□□ 0.55
SUMO3P55854 NCF1B-203ENST00000435988 1254 ntBASIC18.51■□□□□ 0.55
SUMO3P55854 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUMO3P55854 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.51■□□□□ 0.55
SUMO3P55854 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.51■□□□□ 0.55
SUMO3P55854 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SUMO3P55854 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SUMO3P55854 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUMO3P55854 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUMO3P55854 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.51■□□□□ 0.55
SUMO3P55854 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms