Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.19■□□□□ 0.98
PTPN5P54829 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
PTPN5P54829 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN5P54829 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN5P54829 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN5P54829 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN5P54829 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.18■□□□□ 0.98
PTPN5P54829 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
PTPN5P54829 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN5P54829 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PTPN5P54829 AC026471.6-201ENST00000622954 1905 ntBASIC21.18■□□□□ 0.98
PTPN5P54829 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN5P54829 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PTPN5P54829 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.18■□□□□ 0.98
PTPN5P54829 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.18■□□□□ 0.98
PTPN5P54829 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.18■□□□□ 0.98
PTPN5P54829 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN5P54829 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.18■□□□□ 0.98
PTPN5P54829 RBM17P2-201ENST00000616397 1405 ntBASIC21.18■□□□□ 0.98
PTPN5P54829 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.18■□□□□ 0.98
PTPN5P54829 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN5P54829 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.18■□□□□ 0.98
PTPN5P54829 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN5P54829 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN5P54829 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
PTPN5P54829 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PTPN5P54829 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN5P54829 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PTPN5P54829 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PTPN5P54829 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
PTPN5P54829 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.17■□□□□ 0.98
PTPN5P54829 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.17■□□□□ 0.98
PTPN5P54829 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
PTPN5P54829 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.17■□□□□ 0.98
PTPN5P54829 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN5P54829 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.17■□□□□ 0.98
PTPN5P54829 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.17■□□□□ 0.98
PTPN5P54829 POM121L13P-201ENST00000422362 380 ntBASIC21.17■□□□□ 0.98
PTPN5P54829 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.17■□□□□ 0.98
PTPN5P54829 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN5P54829 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
PTPN5P54829 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN5P54829 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN5P54829 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN5P54829 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PTPN5P54829 AC010542.4-201ENST00000563151 1910 ntBASIC21.17■□□□□ 0.98
PTPN5P54829 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN5P54829 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN5P54829 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN5P54829 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN5P54829 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
PTPN5P54829 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN5P54829 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN5P54829 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.16■□□□□ 0.98
PTPN5P54829 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.16■□□□□ 0.98
PTPN5P54829 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.16■□□□□ 0.98
PTPN5P54829 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.16■□□□□ 0.98
PTPN5P54829 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
PTPN5P54829 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN5P54829 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.16■□□□□ 0.98
PTPN5P54829 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN5P54829 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN5P54829 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN5P54829 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN5P54829 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PTPN5P54829 AC113410.3-201ENST00000623366 203 ntBASIC21.16■□□□□ 0.98
PTPN5P54829 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN5P54829 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PTPN5P54829 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN5P54829 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.15■□□□□ 0.98
PTPN5P54829 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.15■□□□□ 0.98
PTPN5P54829 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN5P54829 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.15■□□□□ 0.98
PTPN5P54829 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.15■□□□□ 0.98
PTPN5P54829 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN5P54829 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.15■□□□□ 0.98
PTPN5P54829 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN5P54829 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.15■□□□□ 0.98
PTPN5P54829 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.15■□□□□ 0.98
PTPN5P54829 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.15■□□□□ 0.98
PTPN5P54829 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN5P54829 AC244015.2-201ENST00000616358 1861 ntBASIC21.15■□□□□ 0.98
PTPN5P54829 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN5P54829 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN5P54829 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN5P54829 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PTPN5P54829 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN5P54829 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
PTPN5P54829 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN5P54829 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN5P54829 AL355472.2-201ENST00000422958 438 ntBASIC21.14■□□□□ 0.97
PTPN5P54829 TPM4P1-201ENST00000436100 807 ntBASIC21.14■□□□□ 0.97
PTPN5P54829 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.14■□□□□ 0.97
PTPN5P54829 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN5P54829 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.14■□□□□ 0.97
PTPN5P54829 AC243732.1-201ENST00000612648 864 ntBASIC21.14■□□□□ 0.97
PTPN5P54829 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN5P54829 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN5P54829 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN5P54829 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms