Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LIMK1P53667 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LIMK1P53667 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.3■□□□□ 0.84
LIMK1P53667 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LIMK1P53667 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.3■□□□□ 0.84
LIMK1P53667 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
LIMK1P53667 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
LIMK1P53667 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LIMK1P53667 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LIMK1P53667 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LIMK1P53667 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.3■□□□□ 0.84
LIMK1P53667 AC242852.2-201ENST00000615738 1807 ntBASIC20.3■□□□□ 0.84
LIMK1P53667 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LIMK1P53667 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.29■□□□□ 0.84
LIMK1P53667 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LIMK1P53667 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.29■□□□□ 0.84
LIMK1P53667 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LIMK1P53667 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LIMK1P53667 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.29■□□□□ 0.84
LIMK1P53667 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.29■□□□□ 0.84
LIMK1P53667 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LIMK1P53667 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.29■□□□□ 0.84
LIMK1P53667 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LIMK1P53667 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.29■□□□□ 0.84
LIMK1P53667 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LIMK1P53667 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.29■□□□□ 0.84
LIMK1P53667 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LIMK1P53667 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LIMK1P53667 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
LIMK1P53667 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
LIMK1P53667 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
LIMK1P53667 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LIMK1P53667 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.28■□□□□ 0.84
LIMK1P53667 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LIMK1P53667 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.28■□□□□ 0.84
LIMK1P53667 PRKY-204ENST00000533551 1019 ntBASIC20.28■□□□□ 0.84
LIMK1P53667 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
LIMK1P53667 C2orf69P4-201ENST00000565394 541 ntBASIC20.28■□□□□ 0.84
LIMK1P53667 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.28■□□□□ 0.84
LIMK1P53667 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.28■□□□□ 0.84
LIMK1P53667 AL353708.3-201ENST00000610272 989 ntBASIC20.28■□□□□ 0.84
LIMK1P53667 AL023875.1-201ENST00000640777 796 ntBASIC20.28■□□□□ 0.84
LIMK1P53667 AC092865.7-201ENST00000641832 219 ntBASIC20.28■□□□□ 0.84
LIMK1P53667 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.28■□□□□ 0.84
LIMK1P53667 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
LIMK1P53667 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.28■□□□□ 0.84
LIMK1P53667 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.28■□□□□ 0.84
LIMK1P53667 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LIMK1P53667 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.28■□□□□ 0.84
LIMK1P53667 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LIMK1P53667 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LIMK1P53667 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LIMK1P53667 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.27■□□□□ 0.84
LIMK1P53667 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LIMK1P53667 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LIMK1P53667 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LIMK1P53667 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LIMK1P53667 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LIMK1P53667 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LIMK1P53667 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LIMK1P53667 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LIMK1P53667 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LIMK1P53667 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
LIMK1P53667 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LIMK1P53667 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LIMK1P53667 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.27■□□□□ 0.84
LIMK1P53667 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LIMK1P53667 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.27■□□□□ 0.84
LIMK1P53667 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.27■□□□□ 0.84
LIMK1P53667 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LIMK1P53667 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LIMK1P53667 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LIMK1P53667 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LIMK1P53667 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.27■□□□□ 0.83
LIMK1P53667 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
LIMK1P53667 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LIMK1P53667 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LIMK1P53667 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.27■□□□□ 0.83
LIMK1P53667 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
LIMK1P53667 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LIMK1P53667 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LIMK1P53667 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.26■□□□□ 0.83
LIMK1P53667 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.26■□□□□ 0.83
LIMK1P53667 AC245052.3-201ENST00000450182 901 ntBASIC20.26■□□□□ 0.83
LIMK1P53667 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
LIMK1P53667 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.26■□□□□ 0.83
LIMK1P53667 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.26■□□□□ 0.83
LIMK1P53667 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.26■□□□□ 0.83
LIMK1P53667 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LIMK1P53667 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.26■□□□□ 0.83
LIMK1P53667 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.26■□□□□ 0.83
LIMK1P53667 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.26■□□□□ 0.83
LIMK1P53667 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LIMK1P53667 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.26■□□□□ 0.83
LIMK1P53667 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.26■□□□□ 0.83
LIMK1P53667 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.26■□□□□ 0.83
LIMK1P53667 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LIMK1P53667 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LIMK1P53667 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LIMK1P53667 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms