Protein–RNA interactions for Protein: P51911

CNN1, Calponin-1, humanhuman

Known RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1P51911 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNN1P51911 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNN1P51911 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNN1P51911 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNN1P51911 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNN1P51911 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.06■□□□□ 0.16
CNN1P51911 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNN1P51911 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNN1P51911 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CNN1P51911 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.06■□□□□ 0.16
CNN1P51911 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CNN1P51911 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
CNN1P51911 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
CNN1P51911 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CNN1P51911 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CNN1P51911 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CNN1P51911 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNN1P51911 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNN1P51911 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNN1P51911 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNN1P51911 SLC47A1P1-202ENST00000449666 945 ntBASIC16.06■□□□□ 0.16
CNN1P51911 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNN1P51911 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CNN1P51911 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNN1P51911 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CNN1P51911 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNN1P51911 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNN1P51911 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNN1P51911 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.06■□□□□ 0.16
CNN1P51911 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CNN1P51911 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNN1P51911 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNN1P51911 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNN1P51911 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CNN1P51911 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNN1P51911 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CNN1P51911 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNN1P51911 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNN1P51911 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNN1P51911 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.05■□□□□ 0.16
CNN1P51911 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.05■□□□□ 0.16
CNN1P51911 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CNN1P51911 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.05■□□□□ 0.16
CNN1P51911 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.05■□□□□ 0.16
CNN1P51911 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.05■□□□□ 0.16
CNN1P51911 AL034346.1-201ENST00000568244 1277 ntBASIC16.05■□□□□ 0.16
CNN1P51911 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.05■□□□□ 0.16
CNN1P51911 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNN1P51911 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNN1P51911 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNN1P51911 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNN1P51911 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CNN1P51911 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNN1P51911 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.05■□□□□ 0.16
CNN1P51911 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNN1P51911 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CNN1P51911 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNN1P51911 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNN1P51911 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNN1P51911 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNN1P51911 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.04■□□□□ 0.16
CNN1P51911 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.04■□□□□ 0.16
CNN1P51911 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNN1P51911 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNN1P51911 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CNN1P51911 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CNN1P51911 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNN1P51911 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNN1P51911 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CNN1P51911 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNN1P51911 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNN1P51911 UNC93B3-201ENST00000308076 687 ntBASIC16.04■□□□□ 0.16
CNN1P51911 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNN1P51911 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNN1P51911 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.04■□□□□ 0.16
CNN1P51911 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
CNN1P51911 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNN1P51911 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CNN1P51911 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNN1P51911 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNN1P51911 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.04■□□□□ 0.16
CNN1P51911 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNN1P51911 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.04■□□□□ 0.16
CNN1P51911 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNN1P51911 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.03■□□□□ 0.16
CNN1P51911 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNN1P51911 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNN1P51911 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNN1P51911 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.03■□□□□ 0.16
CNN1P51911 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNN1P51911 AC008406.3-201ENST00000620001 1374 ntBASIC16.03■□□□□ 0.16
CNN1P51911 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNN1P51911 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.03■□□□□ 0.16
CNN1P51911 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNN1P51911 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CNN1P51911 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNN1P51911 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNN1P51911 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNN1P51911 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.03■□□□□ 0.16
CNN1P51911 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms