Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 TSPY26P-201ENST00000476365 1326 ntBASIC20.1■□□□□ 0.81
SLC1A6P48664 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC1A6P48664 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC1A6P48664 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC1A6P48664 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.1■□□□□ 0.81
SLC1A6P48664 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.1■□□□□ 0.81
SLC1A6P48664 AC008764.7-201ENST00000593779 1081 ntBASIC20.1■□□□□ 0.81
SLC1A6P48664 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.1■□□□□ 0.81
SLC1A6P48664 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC1A6P48664 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC1A6P48664 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC1A6P48664 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC1A6P48664 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC1A6P48664 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.09■□□□□ 0.81
SLC1A6P48664 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC1A6P48664 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC1A6P48664 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC1A6P48664 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC1A6P48664 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC1A6P48664 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC1A6P48664 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC1A6P48664 AL136162.1-201ENST00000607711 1078 ntBASIC20.09■□□□□ 0.81
SLC1A6P48664 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.09■□□□□ 0.81
SLC1A6P48664 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC1A6P48664 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.09■□□□□ 0.81
SLC1A6P48664 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC1A6P48664 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC1A6P48664 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC1A6P48664 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
SLC1A6P48664 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC1A6P48664 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC1A6P48664 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC1A6P48664 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC1A6P48664 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.09■□□□□ 0.81
SLC1A6P48664 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.09■□□□□ 0.81
SLC1A6P48664 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC1A6P48664 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC1A6P48664 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.08■□□□□ 0.81
SLC1A6P48664 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SLC1A6P48664 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC1A6P48664 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC1A6P48664 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC1A6P48664 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC1A6P48664 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC1A6P48664 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.08■□□□□ 0.81
SLC1A6P48664 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.08■□□□□ 0.81
SLC1A6P48664 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC1A6P48664 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC1A6P48664 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC1A6P48664 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC1A6P48664 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SLC1A6P48664 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC1A6P48664 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC1A6P48664 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
SLC1A6P48664 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.08■□□□□ 0.8
SLC1A6P48664 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SLC1A6P48664 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SLC1A6P48664 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC1A6P48664 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC1A6P48664 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC1A6P48664 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC1A6P48664 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC1A6P48664 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC1A6P48664 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC1A6P48664 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC1A6P48664 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.07■□□□□ 0.8
SLC1A6P48664 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC1A6P48664 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.07■□□□□ 0.8
SLC1A6P48664 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC1A6P48664 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC1A6P48664 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SLC1A6P48664 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.07■□□□□ 0.8
SLC1A6P48664 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.07■□□□□ 0.8
SLC1A6P48664 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A6P48664 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A6P48664 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A6P48664 AC116562.4-201ENST00000641316 2276 ntBASIC20.06■□□□□ 0.8
SLC1A6P48664 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC1A6P48664 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A6P48664 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.06■□□□□ 0.8
SLC1A6P48664 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A6P48664 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC1A6P48664 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SLC1A6P48664 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC1A6P48664 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A6P48664 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SLC1A6P48664 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A6P48664 AC099791.1-201ENST00000416440 715 ntBASIC20.06■□□□□ 0.8
SLC1A6P48664 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A6P48664 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC1A6P48664 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A6P48664 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A6P48664 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC1A6P48664 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
SLC1A6P48664 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A6P48664 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SLC1A6P48664 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC1A6P48664 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC1A6P48664 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC1A6P48664 AC135279.3-201ENST00000610945 1311 ntBASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms