Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AL162377.1-201ENST00000618844 1793 ntBASIC19.8■□□□□ 0.76
SLC6A12P48065 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.8■□□□□ 0.76
SLC6A12P48065 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A12P48065 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A12P48065 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.79■□□□□ 0.76
SLC6A12P48065 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
SLC6A12P48065 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A12P48065 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A12P48065 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC6A12P48065 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC6A12P48065 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A12P48065 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.79■□□□□ 0.76
SLC6A12P48065 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A12P48065 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A12P48065 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC6A12P48065 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A12P48065 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC6A12P48065 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.79■□□□□ 0.76
SLC6A12P48065 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.79■□□□□ 0.76
SLC6A12P48065 BID-214ENST00000617586 542 ntTSL 5 BASIC19.79■□□□□ 0.76
SLC6A12P48065 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SLC6A12P48065 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
SLC6A12P48065 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A12P48065 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.79■□□□□ 0.76
SLC6A12P48065 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A12P48065 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A12P48065 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A12P48065 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.79■□□□□ 0.76
SLC6A12P48065 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
SLC6A12P48065 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A12P48065 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A12P48065 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.78■□□□□ 0.76
SLC6A12P48065 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A12P48065 AC068338.2-201ENST00000563278 1430 ntBASIC19.78■□□□□ 0.76
SLC6A12P48065 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A12P48065 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC6A12P48065 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.78■□□□□ 0.76
SLC6A12P48065 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.78■□□□□ 0.76
SLC6A12P48065 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A12P48065 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A12P48065 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A12P48065 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A12P48065 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A12P48065 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A12P48065 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A12P48065 AL512408.1-201ENST00000569378 2000 ntBASIC19.78■□□□□ 0.76
SLC6A12P48065 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A12P48065 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A12P48065 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SLC6A12P48065 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.77■□□□□ 0.76
SLC6A12P48065 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.77■□□□□ 0.76
SLC6A12P48065 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A12P48065 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A12P48065 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A12P48065 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.77■□□□□ 0.76
SLC6A12P48065 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A12P48065 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SLC6A12P48065 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A12P48065 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A12P48065 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.77■□□□□ 0.76
SLC6A12P48065 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.77■□□□□ 0.76
SLC6A12P48065 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SLC6A12P48065 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A12P48065 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.77■□□□□ 0.76
SLC6A12P48065 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SLC6A12P48065 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A12P48065 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A12P48065 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SLC6A12P48065 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
SLC6A12P48065 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A12P48065 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A12P48065 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A12P48065 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.77■□□□□ 0.75
SLC6A12P48065 AC087633.2-202ENST00000565166 1439 ntBASIC19.76■□□□□ 0.75
SLC6A12P48065 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A12P48065 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A12P48065 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A12P48065 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC6A12P48065 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC6A12P48065 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A12P48065 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.76■□□□□ 0.75
SLC6A12P48065 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.76■□□□□ 0.75
SLC6A12P48065 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A12P48065 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A12P48065 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.76■□□□□ 0.75
SLC6A12P48065 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A12P48065 AC092437.1-201ENST00000624794 1048 ntBASIC19.76■□□□□ 0.75
SLC6A12P48065 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC6A12P48065 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A12P48065 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A12P48065 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A12P48065 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC6A12P48065 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A12P48065 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.75■□□□□ 0.75
SLC6A12P48065 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A12P48065 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A12P48065 CYP21A1P-202ENST00000354927 1481 ntBASIC19.75■□□□□ 0.75
SLC6A12P48065 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SLC6A12P48065 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
SLC6A12P48065 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms